Seriola lalandi dorsalis (Yellowtail amberjack): 111668893
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Entry
111668893 CDS
T06058
Symbol
smo
Name
(RefSeq) smoothened homolog
KO
K06226
smoothened
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
111668893 (smo)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
slal04030
]
111668893 (smo)
G protein-coupled receptors [BR:
slal04030
]
Frizzled / Smoothened family
111668893 (smo)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Frizzled
Fz
Dicty_CAR
DUF6312
Motif
Other DBs
NCBI-GeneID:
111668893
NCBI-ProteinID:
XP_023280812
Ensembl:
ENSSLDG00000025077
LinkDB
All DBs
Position
Unknown
AA seq
826 aa
AA seq
DB search
MSSHGWSPIVGFYGMLCVWAAWLSGSGAVLSPNGTIFEDNCKKTTTCEALKYNTCLGSPL
PYTHTSLILAEDSSTQEEAFEKLTMWSGLRNAPRCWSVIQPLLCAVYMPKCENGRVELPS
QSLCLATRQPCSIVDQERGWPGFLKCDKFPVGCSNEVQKLKFNTSGQCEAPLVKTDIQSS
WYKDVEGCGIQCDNPLFTEAEHNDMHVYIAYFGTITLLCTFFTLATFLADWKNSNRYPAV
ILFYINACFFVGSIGWLAQFLDGARKEIVCKSDNTMRLGEPSSSETLSCVTIFIIVYYSL
MSGVIWFVMLTYAWHTSFKALGTTHQPLSGRTSYFHMVTWSIPFVLTVAILAIAEVDGDS
VSGICFVGYKNYRYRAGFVLAPIGVVLVVGGYFLIRGVMTLFSIKSNHPGLLSEKAASKI
NETMLRLGIFGFLAFGFVFITFGCHFYDFFNQAEWERSFREYVLCEANVTIASQTNKPIP
ECTIKNRPSLMVEKINLFSMFGTGIAMSTWVWTKATILIWKRTWCKIIGRSDNEPKRIKK
SKMIAKAFAMRKELHKDPEKELSFSMHTVSHDGPVAGINFDLNEPSNDMSSAWAQHVTKM
VARRGAILPQDISVTPTGTPVPPPEERNRLWMVEAEISPEMIKRKKKKKKRKKEVRPVKE
VVDHQAYHQREFGRSSVPRLPKLPCHPSLVANLREQQRQQQKLEEEVLPGSYPDFQPSHP
LSCEDRCPYPYQSSQNSYGHRLLSNPLTLNDRPEDLGLGPRCPPSTSTWQPRGTSHYPRE
VDLSDGLSERLAHVARVPAGRRAGYGPIHSRTNLMEAELMDADSDF
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccacggctggagccccattgttggattttacgggatgctttgcgtctgggct
gcctggctttcaggctccggggcagtgttgtctccaaacgggacgatatttgaagacaac
tgcaagaaaacgacaacttgcgaggcacttaaatacaacacatgcctgggatctccttta
ccgtatacacatacttctctgatcctggcggaggactccagcacccaagaagaggctttt
gagaagttgaccatgtggtctggtttgcggaacgctcctcgctgttggtcggtcatccag
ccgctgctctgtgccgtctatatgcccaaatgtgagaatggtcgggtggagctgcccagc
cagagcctgtgtctggctacacgtcagccctgcagcatcgtggaccaggagagaggatgg
cccggcttcctcaaatgtgacaagttccctgtgggatgttcgaacgaggtgcagaagctg
aagtttaacacatcgggccagtgtgaagctcctctggtgaagacggacattcagtcgagc
tggtacaaggacgtggagggctgcggcatccagtgtgacaaccctctgttcaccgaggcc
gagcacaacgacatgcacgtctacatcgcttacttcggcaccatcaccctcctctgcacc
ttcttcaccctggccacatttctcgccgactggaaaaactcaaaccgctacccagccgtc
attctcttctacatcaacgcctgtttcttcgtgggcagtattggctggctggctcagttc
ctggatggagcacgcaaggagattgtgtgcaagagtgacaacaccatgcgactcggggag
ccctcgtcttcagagacactgtcatgtgtcaccatcttcatcatcgtttactactccctg
atgtcaggtgtgatttggtttgtcatgctgacctatgcctggcacacgtccttcaaagcc
ctgggcaccacccaccagccgctgtctggccgaacctcctacttccacatggtcacctgg
tccatccccttcgtcctcactgtggccatcctggctatcgctgaggtcgacggagattca
gtgagtgggatttgttttgtcggctacaaaaactacagataccgcgctggatttgtgctg
gcacccattggtgttgtgcttgtcgtcggcggctacttcctcattcggggcgtcatgacc
ctgttttccatcaagagtaaccacccaggactactgagcgagaaagcagccagcaaaatc
aacgagaccatgctgagactgggcatatttgggttccttgcttttggctttgttttcatc
accttcgggtgccacttttacgacttcttcaaccaggctgaatgggagaggagcttcaga
gaatacgtgctgtgtgaagccaacgtgacgatcgcctctcagaccaacaagccgatccca
gaatgcaccattaagaaccggccaagcctcatggtggagaaaatcaacctgttctccatg
tttgggactggaatcgccatgagcacctgggtgtggaccaaagccaccatcctcatctgg
aaacgcacctggtgcaagattattggccgcagcgacaatgaacccaagaggatcaagaag
agcaagatgattgccaaggcgtttgcaatgaggaaggagctccacaaggaccctgaaaag
gagctgtcgttcagcatgcacactgtgtctcatgacgggcccgtggctggaatcaatttt
gacctcaatgagccatccaatgacatgtcatcagcctgggcacagcatgtgactaagatg
gtggccaggcgaggtgccatcctgccgcaggacatttctgtcacacctactggtacacca
gtgccacctccagaggagaggaacagactgtggatggtagaggctgagatttcaccagag
atgattaagaggaaaaagaagaagaagaagaggaagaaggaggtgcgtccagtgaaggag
gtggtggaccaccaggcttatcatcagcgtgagtttggccgcagctcagtgcctcgcctg
cccaaactgccttgccacccgagcctggttgccaatctgcgggaacagcagaggcaacag
cagaagctggaggaggaagtcctgccagggtcctacccagacttccaaccctcacaccct
ctgtcctgtgaggacagatgtccctacccctaccagagcagtcagaacagctacggccac
aggctgctctctaatcctctgaccctcaacgatcgtccggaggatctgggtctcggccca
cgctgccccccctcaacttccacctggcagcctagaggaacttcccactaccccagggag
gtggatctcagcgacgggctgtcagagaggttggcccacgtggctcgggtaccagcgggc
cgaagggccggctatggtcccatccactcccggacgaatttaatggaggcggagctcatg
gatgctgactctgacttctaa
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