Seriola lalandi dorsalis (Yellowtail amberjack): 111669362
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Entry
111669362 CDS
T06058
Name
(RefSeq) ATP-dependent RNA helicase DDX19A-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03013
Nucleocytoplasmic transport
slal03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111669362
03015 mRNA surveillance pathway
111669362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111669362
Enzymes [BR:
slal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111669362
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111669362
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
111669362
NCBI-ProteinID:
XP_023281397
Ensembl:
ENSSLDG00000017107
LinkDB
All DBs
Position
Unknown
AA seq
487 aa
AA seq
DB search
MSEDSWALAVDVQEATTPSLQFDFSKKVDRVRGPRNMRGDINGNIVPEKSENGGWRRDAD
KVDLAEQSLLNKLIRRSLVRNRNQVEVLQRDPTSPLYSVKTFEELRLKPELLKGVYNMGF
NRPSRIQENALPMMLAQPPQNLIAQSQSGTGKTAAFSLAMLSHVNPANKWTQCLCISPTY
ELALQIGQVIEQMGKFCPDVKLAYAIRGNRMERGIKLQDQIVIGTPGTVLDWCTKYKLID
PKKITMFVLDEADVMIATQGHRDQSIRIHRQLTKDCQMLLFSATFEDSVWRFAEQVVPDP
NIIRLKREEETLDTIKQFYVLCKEKEDKFTALCNLYGSLTIAQAMIFCHTRKMAAWLTAH
LTKEGHQVALLSGEMTVEQRAAVIERFRNGKEKVLVTTNVCSRGIDVEQVSLVVNFDLPV
DMDGNADNETYLHRIGRTGRFGRRGFAVNMVDSKHSMDIINQIEMHFNRRITKLDTSNLE
EMESLMS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagactcgtgggcgctggctgtcgatgttcaagaggctacaactccatcacta
cagtttgacttctccaagaaagtggatcgagtgcgtggtccgcgtaacatgagaggagac
ataaacggcaatattgtgccggagaagagtgaaaatggaggctggcgaagagacgcggac
aaagtggacctggccgaacagtccctgttgaataagctgatccgccgctctctggtgcgg
aaccggaaccaggtggaggtcctgcagagggaccccacctctcctctctactccgtgaag
accttcgaggagctgagactcaaacctgagctgttgaagggtgtgtacaacatgggtttc
aacagaccatccagaatccaggagaatgctttgcccatgatgctggcgcaaccacctcag
aatctgatcgcccagtcacagtctggcacgggcaaaactgctgctttttctctggccatg
ctcagccatgtaaacccagccaataagtggactcagtgcctttgcatctcaccaacatat
gagctcgctctgcagattggtcaagtgatcgagcaaatggggaaattttgtccagatgtg
aagctggcgtacgccatacgaggcaacagaatggagcgaggcatcaagttgcaggaccag
attgtcattgggacaccaggcacagtcctcgactggtgcaccaagtacaagctcatcgac
cccaagaagatcactatgtttgtgttggacgaggctgatgtgatgatcgccacgcagggt
catcgggaccagagcattcgtatccacagacagctgacgaaggactgtcagatgctcctt
ttctctgcaacctttgaggactctgtgtggaggtttgcagagcaggtggttcccgacccg
aacatcatcaggctgaagcgcgaagaggagacactggacaccatcaagcagttctatgtt
ctctgcaaggagaaggaagacaagttcacagcactctgcaatctgtacggaagccttacc
atcgcacaggccatgatcttctgccatactcgtaaaatggctgcttggctgactgcacac
ctgaccaaagagggccaccaggtggcgttgctgagtggagaaatgacggtggagcagaga
gccgctgtcatcgaacgcttcaggaatggcaaagagaaggtgcttgtgaccacaaatgtg
tgctccagaggtattgatgttgagcaggtgtcacttgtggtcaactttgacctcccagtg
gacatggacgggaatgccgacaatgagacatacctgcaccgtattggccgcacaggacgc
ttcggcagaagaggatttgctgtcaatatggtcgacagcaaacacagcatggatattatc
aaccaaattgagatgcatttcaacagaagaatcacaaaacttgacacgagcaatcttgaa
gaaatggaaagcctgatgagctga
DBGET
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