Sphingomonas lacunae: GV829_10285
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Entry
GV829_10285 CDS
T07071
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
slan
Sphingomonas lacunae
Pathway
slan00521
Streptomycin biosynthesis
slan00523
Polyketide sugar unit biosynthesis
slan00541
O-Antigen nucleotide sugar biosynthesis
slan01100
Metabolic pathways
slan01110
Biosynthesis of secondary metabolites
slan01250
Biosynthesis of nucleotide sugars
Module
slan_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
slan00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
GV829_10285 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GV829_10285 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GV829_10285 (rfbC)
Enzymes [BR:
slan01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
GV829_10285 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QJQ32784
UniProt:
A0A6M4AUR8
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All DBs
Position
2133469..2134020
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AA seq
183 aa
AA seq
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MPFTVTPTNLPEVLILEPRVFGDDRGYFYESFNARDFGEATGLSVEFVQDNHSKSAKGVL
RGLHYQVRQTQGKLVRVVAGEVFDVAVDLRQDSPRFGQWTGVRLSADNHRQLWIPAGFAH
GFLVTEGPAEFLYKTTDYWSAPDERCLLWNDPQIGIDWPLDGQPSLSPKDIAGALLSEAD
RLG
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgccctttaccgttacaccaacaaatcttcccgaagtcctcatcctcgaaccgcgcgtg
ttcggcgatgatcgcggctatttctacgaaagcttcaatgcccgcgacttcggcgaggcg
actgggctatccgtggagtttgtccaggacaatcattcgaaatctgcaaagggcgtgctg
cgcggtcttcattatcaggtgcggcagacgcaaggaaagctggttcgtgtcgtggccggc
gaggtgtttgatgttgccgtcgatttacggcaggactctcctcgtttcggccaatggaca
ggtgtgcgcctgagtgcagacaatcatcggcagctctggattcctgcgggtttcgctcat
ggatttctggtaacggaaggcccggctgaatttttgtacaagacgactgattattggtct
gctccggatgagcgctgcctgctttggaatgatccgcagatcggcatcgattggccactt
gacgggcagccgtctctctcgccaaaggatatcgcaggagctctgctctcagaggccgat
cgactgggttga
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