Sugiyamaella lignohabitans: AWJ20_1366
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Entry
AWJ20_1366 CDS
T05270
Symbol
PRP5
Name
(RefSeq) DEAD-box RNA helicase PRP5
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AWJ20_1366 (PRP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slb03041
]
AWJ20_1366 (PRP5)
Enzymes [BR:
slb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AWJ20_1366 (PRP5)
Spliceosome [BR:
slb03041
]
Complex A
U2 snRNP components
U2 related factors
AWJ20_1366 (PRP5)
Complex B
AWJ20_1366 (PRP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
30033160
NCBI-ProteinID:
XP_018735564
UniProt:
A0A161HJV5
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All DBs
Position
A:complement(join(4233936..4236611,4236801..4237196))
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AA seq
1023 aa
AA seq
DB search
MSDYRDRYSHRESDRYGRRDDYRHDRRREYDRENGRDRYRDRYSSNHERDRDGDRKRDRP
SHHEIEGKSDREYHDHRSHDERDTNSRLRTSPERKNRSVSPVKRREVAPTPETKSPVPGS
TNPVTSTTELTEKKQEKLRARQEKLRLWQLKKESEAAEKRRSESPSDDIKGSTTPNEKGT
ENGSVPGSRRENNQVKQENKPKQLQTSQTAFKTTDNTKANLKLGFGPNNGPKKAAIKTVM
TARRAFMDDGDDDEETLTHRRRPPPKLLPMTDESIKEHESKINGNDMDIDEIDPLDAYMS
EMREQVKSAETTAAPLPASVADEQEEAMDSINESAADEGGLEDYNPDDPQAFMRMIENKK
KKDVIQVDHSKINYEPFRKNFYVEPQELADMTPADVDMLRLELDGIKTAGVDVPKPGVKW
EHFGLPQSTMQVIRSLGYDKPTSIQAQAIPAIMSGRDVIGVAKTGSGKTMAFLLPLFRHI
KDQRPLANMEGPMSIIMTPTRELALQIFKECKPFLKALDLTGMCAYGGSPIKEQIAELKR
GVEIIVCTPGRMIDLLAANSGRVTNLRRVTYLVLDEADRMFDMGFEPQVMKILRNIRPDR
QTVLFSATFPRQMEALAKKTLDKPVEIIVGARSVVAPEITQIVEVRPDNEKFLRLLELLG
EFYYENEDKDARALIFVDRQEAADDLLKGLIGRGYPCMSIHGGKDQVDRDSAISDFKRGV
VSLLIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRVGRTGRAGNTGTAVTFITPDQER
SAMDIAKALRLSKTPVPDAVRELADKFQAKIKSGKQKFTNTGFGGRGLDKLDVIRDSKKN
KERKVFGDEDDAGEKEDNDVDADTDTAEITASSTPKPKSGPLTSQDLLDSKVVITAGTEP
SSSTLKNKIVAGQSADNLGPDSGKFHTTLEINDLPQKARWAVTSNSTTTRLVDLYGCSFT
VKGEYYPPGQKPGDQGARKLYILIEGDSEDSVAKSHKALVALAKTAIEAEETEKRAAGGR
YSI
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactatcgtgacaggtattctcaccgagagagcgaccggtatggtcgccgagat
gattataggcatgatcgtaggagagagtatgaccgtgaaaatggtagagatcgttacagg
gatagatatagttctaaccacgagcgagacagagacggagacagaaaacgtgatagacca
tctcaccacgagatagagggtaaaagcgaccgtgagtaccacgaccaccgcagccacgat
gagcgagatactaattcgagactacggactagtcctgaaaggaaaaatcgcagtgttagt
cctgtgaagcgcagagaagtcgccccaacgccggagactaagtctccagtacctggatct
actaaccccgtcacatccactacagagctgactgaaaagaagcaagaaaaacttcgagcg
cgtcaagaaaagctacgactttggcaactcaagaaagagtctgaagcagctgaaaagcgg
agaagtgagagtccttcagatgatatcaagggaagtactacaccaaatgagaaaggaaca
gagaatggcagtgttccgggcagtcgaagagagaataaccaagtaaagcaggagaacaaa
ccaaaacaactgcagacatctcagactgcattcaagactacagacaataccaaggcaaat
cttaaactgggatttggtccaaataatggacccaagaaagctgcgataaagactgtgatg
acggcacgaagagcattcatggatgatggggacgacgatgaagagaccttgacccatcgc
cgacgacctcctccaaagcttctaccaatgacggacgagtcaataaaggaacacgaatca
aaaattaacggtaatgatatggatattgatgaaatagatccactcgatgcatatatgtct
gagatgagagagcaagttaaatcagctgaaactacagcagctcctcttccggcgtcagtt
gccgacgagcaggaagaggcgatggacagcataaacgaatctgcagctgatgaaggcggg
ctagaagattataacccagacgatcctcaggcatttatgaggatgattgaaaataagaag
aaaaaagatgtgatccaagtcgatcattccaagataaattacgaaccattcagaaagaat
ttttatgtagagccacaggagctggccgacatgacgccggccgatgtagatatgcttaga
ttagagctggatggaatcaagaccgctggtgtagatgttccaaagccaggtgttaaatgg
gagcattttggacttccgcagtctactatgcaggtgatccgaagtcttggctatgacaag
ccaacttccattcaggcacaagctattcctgctattatgtctggacgtgatgttattggc
gtagccaagacaggaagtggtaaaacaatggcctttttattacctttatttcgacacatt
aaagatcaacgacccttggccaatatggagggaccaatgtcaataattatgacacctaca
cgtgagctggccctccaaatttttaaagagtgtaaaccattccttaaggctctggatttg
acaggtatgtgcgcttatggaggatcaccaatcaaagagcagatagcagaattaaaaaga
ggcgtggagattatcgtttgtactccaggaagaatgattgatttgttagcagccaactct
ggtcgagtgaccaatcttcgacgagttacctatttggttctagatgaagctgatagaatg
tttgacatgggttttgaacctcaggtgatgaagatacttcgaaacattcgacctgataga
caaacagttttattttcggcgacttttcctagacaaatggaagcactagcaaagaagaca
cttgataagccggttgaaatcattgttggagcaaggagtgtggttgcacctgagattact
cagattgtagaagttaggccagataatgaaaaattcttgcgtctactggagcttttggga
gaattttattatgagaatgaggacaaggatgctagagcattgatatttgttgaccgacaa
gaagctgctgacgatttgcttaagggtcttatcggtcgtggatacccctgcatgtctatt
catggtggtaaggaccaagttgatagagattcggcaattagtgacttcaaacgaggtgtt
gtctcgttattaattgccacctcagtagcggcacgtggactagatgtaaaacagctgaaa
ttggttatcaactatgacgctcctaatcatatggaggactacgttcatagggttggacga
acgggaagagctggaaatactggtacagcggtgacatttattactcctgaccaagagaga
agtgccatggatattgccaaggcgctcagactcagtaaaacaccagtaccagatgctgta
agggagttggcagacaagtttcaggccaaaattaaatctggtaagcaaaagttcaccaac
accggatttgggggtagaggactcgacaagttggatgtcatacgtgactctaagaagaac
aaagagcgtaaagtattcggtgatgaggatgatgctggcgaaaaggaggataatgatgtt
gatgcagatacagatacagctgaaataactgccagtagtactcctaagcccaagagtggt
ccacttactagtcaagatttgctggattctaaagtagtcatcacagctggaacagaaccc
tcttcaagtactctcaaaaacaaaattgtggctggtcaatcggctgataatctgggccca
gattcaggaaagttccataccacacttgaaatcaatgatcttcctcagaaagctcgatgg
gctgtcacgagtaactcgactacaaccaggctcgttgacctgtatggatgttcctttaca
gttaaaggagagtattacccaccgggccaaaaacctggtgaccagggagctcgcaaattg
tatatattgatcgaaggagacagcgaagattcagtagctaaatcacacaaagcattggta
gcattggcaaaaacagctatcgaagccgaagagacagaaaaacgtgctgctggtggccga
tattccatctga
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