Sugiyamaella lignohabitans: AWJ20_1998
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Entry
AWJ20_1998 CDS
T05270
Symbol
RPD3
Name
(RefSeq) histone deacetylase RPD3
KO
K11482
histone deacetylase HOS1 [EC:
3.5.1.98
]
Organism
slb
Sugiyamaella lignohabitans
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slb03036
]
AWJ20_1998 (RPD3)
Enzymes [BR:
slb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
AWJ20_1998 (RPD3)
Chromosome and associated proteins [BR:
slb03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
AWJ20_1998 (RPD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
30033860
NCBI-ProteinID:
XP_018736887
UniProt:
A0A161HFP4
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All DBs
Position
B:98510..99682
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AA seq
390 aa
AA seq
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MPVAYAYSEELIEYADKLPSNKGRASRVNALIESFGLMDKFDGIIRVKPCTQADLEKYHD
KNFIKFLLTGDDGLDAESETEGEESDESYEGKDEPVSKEALYGLHYDCPPFDGLEKYVKL
VAGATLQCADYLVSLLDTDIAQNTSKVAINWTGGRHHAKRAACSGFCYVNDINLGIQRLR
TKFDKVLYVDLDLHHGDGVETAFAYSDKVKSVSVHRYERGFFPGTGGMNTTSRSVVNIPT
KYGLSDKSFIQIFDTIIVAEKEDFQPDAVVVTTGCDGLARDELREWNLSFSSFEYIIDQI
VNSWKLPTLLLGGGGYHTLDTARCLAICTAAALNVPDRKQWVEIPMHDYFNEYVKDNYSL
RVESHVRHNTPDENSEEYLKKLADYFEHRR
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgccggtagcgtatgcgtatagtgaagagctaattgaatatgctgataagctaccctcg
aataaggggagagcgtccagggtgaatgccttgatcgagtcctttggtttaatggacaag
tttgatggcatcattcgcgtgaaaccatgcacacaagcggatctcgaaaaatatcacgat
aaaaattttattaagttcctattgaccggtgacgacggactggatgctgaaagtgaaacg
gaaggagaagaaagtgacgagagttacgaagggaaggacgagcccgtgtccaaagaagcg
ctttatggattacactatgactgtccgccgtttgacggtttagagaagtatgttaagctt
gtagcaggagctactctacaatgtgctgattacttagtgagtcttcttgatacagacata
gcccaaaacacgtctaaagtggctatcaattggacaggaggaaggcatcacgctaagcgt
gctgcatgctctggattctgttacgtcaacgacatcaatttaggaatacaacgattgaga
acaaaatttgataaagttctatacgttgatctcgacctccatcatggggatggggttgaa
acggcgtttgcttattctgacaaagtgaaatcggtatctgtccaccgttatgaaagaggg
ttctttcctgggacaggagggatgaataccacgtcacgttcggttgtaaacatccctact
aaatatgggttatcagataaatcatttattcaaatttttgataccattattgtggcagaa
aaggaagattttcagccggatgcggtagttgtcacaactggatgtgatggtttagctcgt
gacgagttacgagaatggaatttgtccttttcatcttttgaatatataatcgaccagata
gttaacagctggaagctaccaacactattactcggaggagggggttatcacactctagat
acagctagatgtctcgcgatttgtaccgctgcggccttgaatgttcctgacagaaaacaa
tgggttgagataccaatgcacgattacttcaacgaatacgttaaagacaactattcactt
cgggttgaaagtcacgtcaggcataacactccagacgaaaactctgaggagtatttaaaa
aagctggctgattattttgaacatcggcgatag
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