Sugiyamaella lignohabitans: AWJ20_4754
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Entry
AWJ20_4754 CDS
T05270
Symbol
ROK1
Name
(RefSeq) RNA-dependent ATPase ROK1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
slb
Sugiyamaella lignohabitans
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slb03009
]
AWJ20_4754 (ROK1)
Enzymes [BR:
slb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AWJ20_4754 (ROK1)
Ribosome biogenesis [BR:
slb03009
]
Eukaryotic type
90S particles
Helicases
AWJ20_4754 (ROK1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
30036920
NCBI-ProteinID:
XP_018736284
UniProt:
A0A161HKX2
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Position
D:445059..446798
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AA seq
579 aa
AA seq
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MDIFKLLSRGATIQRNGKHQKDLELFNPNATAAKEVAAGSDSVDLKIAKEIDFFKNASKA
DKKAKKVSSETNNKDKKVKQSNKNVIDNRNDEDDEEDDAVSVPLSITSPEEASVQRKKFK
IKTTGDDIPLPIGSFEDLTTRFQLHRHLLRNLEQQNFSSPTAIQSESIPILLHGRDLIAC
APTGSGKTLAFSIPLVQSLKEHKTTGIRCLIVSPTKELATQIYNEVVKLSRGRDLNICIL
TKAAAAKFRNDALSRQKFDILITTPLRLVDAVKSEIIDLSHVQHLVLDEADKLFEQGFLE
QTDDILAACSNPRLQKALFSATIPSGVEEMAKTIMHSPIRIIVGHKEGASHDIDQKLVYA
GNEQGKLIAIRQMITGGEVVPPVIIFVQSIQRAKALFHELLYDKVNVDAIHGERTQNQRD
KVIERFKQGEIWVLICTDVLSRGIDFRGVNLVINYDVPQSSQSYVHRIGRTGRAGRAGKA
VTFFTKDDHDAVKNVVNVMKQSGCDVGDWMLKMKKITKNDKKQLKKKPVERTEISTVPSV
IRQKRKQRRDMVEASKKRKLHSTDDGPASAEQSSDEASD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggatatctttaaactactctcgagaggagcgactattcagagaaatggcaagcatcag
aaggatttagaactgtttaatccaaatgctactgctgccaaggaagtggcagcaggctct
gattcggtagatctgaagattgcaaaggaaattgattttttcaaaaacgcatccaaggct
gataaaaaggccaaaaaggtgtctagtgagaccaataataaagataaaaaggtgaaacaa
agtaacaaaaatgtcattgataatagaaatgacgaggatgacgaggaggatgacgctgtt
agtgtaccactctctattacttctccagaagaggccagtgttcaacgtaaaaagttcaag
atcaagaccacgggtgacgatattcctcttccaattggctcgtttgaagatttgacgacg
agattccaattacatcgccatttattgcgtaatctcgagcaacagaatttctcatcacct
acagcgattcagtccgagtcaattcccattcttcttcatggaagagatcttattgcctgt
gctccaactggttcaggtaaaacattagcatttagtattcctttggtccaatctcttaaa
gagcacaaaacaaccggtataaggtgcctgatagtatctcctactaaagagctggctact
caaatctacaatgaagtcgttaagctctcaagaggtcgtgatctcaatatttgcatttta
acaaaagcagctgctgctaaattcagaaatgacgctttatcgagacagaaattcgatatt
ctcatcaccactcctctgcgtttagtggatgctgtcaaatctgaaatcatcgacttgtct
catgttcaacacttagtactcgatgaagctgataagctatttgaacaaggcttcttagaa
cagactgacgatattttggctgcctgttccaatccaagattacaaaaagctctcttttca
gccactattccatctggtgtagaagagatggccaagactataatgcactcacctattcgt
atcattgttggtcataaggaaggtgcatcgcatgatattgaccagaagctagtatatgct
ggaaacgagcaaggtaaacttattgccatcagacaaatgattactggtggtgaggtagta
ccgccagttatcatcttcgtacagtcgattcagcgtgccaaagcattattccatgagtta
ctatatgacaaagtcaatgttgatgctattcatggtgaacgtacacaaaatcaaagagac
aaagtaattgaaagattcaagcaaggtgagatctgggttttgatctgtactgatgttttg
tcaagaggtattgatttccgaggggtgaatcttgttattaactacgatgtaccacaatcc
tcacagtcgtatgtgcacagaattggtcgtactggtcgtgctggacgtgctggtaaagca
gtgactttcttcacaaaggacgaccacgacgctgtgaagaatgtcgtcaatgtcatgaaa
caaagtggctgcgatgttggtgattggatgctcaagatgaagaaaatcaccaaaaacgac
aagaagcaactgaagaagaaacctgtggagagaaccgagatttccactgttccatctgtc
atccgtcaaaagcgtaagcagcggcgagatatggttgaagcttccaaaaagcgaaagctt
cacagtacagatgatggtcctgcctcagccgagcaatcctctgatgaagcatctgattag
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