Staphylococcus lugdunensis HKU09-01: SLGD_00903
Help
Entry
SLGD_00903 CDS
T01177
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
slg
Staphylococcus lugdunensis HKU09-01
Pathway
slg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SLGD_00903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slg03021
]
SLGD_00903
03019 Messenger RNA biogenesis [BR:
slg03019
]
SLGD_00903
Transcription machinery [BR:
slg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
SLGD_00903
Messenger RNA biogenesis [BR:
slg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SLGD_00903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA
ATPase_2
Spore_III_AA
Mor
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ADC87041
LinkDB
All DBs
Position
966058..967374
Genome browser
AA seq
438 aa
AA seq
DB search
MPERLRTSPQYESFHELYKNYTTKDLTQKAKDLKLSNYSKLNKKELVLAIMEAQMEKDGN
YYMEGILDDIQPDGYGFLRTVNYSKGEKDIYISASQIRRFEIKRGDKVTGKVRKPKDNEK
YYGLLQVDFVNDQNAEEVKKRPHFQALTPLYPEERIILETDSHNYSTRIMDLVTPIGLGQ
RGLIVAPPKAGKTSLLKEIANAISVNKPEAKLFILLVGERPEEVTDIERSVESAEVVNST
FDEPPEHHTKVAELLLERAKRLVEIGEDVIILMDSITRLARAYNLVIPPSGRTLSGGLDP
ASLHKPKAFFGAARNIEAGGSLTILATALVDTGSRMDDMIYEEFKGTGNMELHLDRKLAE
RRVFPAIDIGRSSTRKEELLISKSELDSLWQLRNMFTDSTDFTERFIRKLKRSKSNKEFF
EQLQQAAKESTKTGKPII
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaagattaagaacatcaccgcaatatgagtcatttcatgaactctataaaaat
tatacaacgaaagatttaacgcaaaaagcaaaagatttaaagttatctaattacagtaaa
ttaaataaaaaagaattagtattagccattatggaagcccagatggaaaaagatgggaat
tattacatggagggtattttagatgatatccagccagatggttatggttttttaagaaca
gtcaactattcaaaaggggaaaaagatatttacatatctgcgagccaaattcgtcgcttt
gaaattaaacgtggcgacaaggtgactgggaaagttagaaagccaaaagataatgaaaag
tattatggtctattacaagtagatttcgtcaatgatcagaacgccgaagaagtaaaaaaa
cgtcctcacttccaagctttaactccactttatccggaagaacgtatcattttagaaact
gattctcacaactattcaacaagaattatggatttagttacaccaattggccttggtcaa
cgtggacttattgttgcaccacccaaagctggtaaaacatcgttattaaaagaaatagct
aatgcaattagtgtgaataaacctgaagcaaaattatttattttacttgtaggtgaacgt
cctgaagaagtcactgacattgaacgatcagtggaatctgctgaagtagtaaactcgacg
tttgacgaacctccagaacaccatactaaagttgctgaacttttattagaacgtgctaag
cgtttagttgagataggggaagatgttatcattctcatggattccattacacgtctagca
agagcatacaacttagttatacctcctagtggccgtactttatctggtggattagaccca
gcttcgttgcataagccaaaagctttctttggtgctgcacgtaatatagaagctggtggc
agtttaaccattttagcgacagctttagtagatacgggatcacgaatggacgatatgatt
tacgaagagtttaaaggtactggtaatatggaacttcacttagacagaaaattagcagaa
cgtcgtgtattccctgctattgatattggacgaagctcaacacgtaaagaagaattgctt
attagtaaatcagagttggattcattatggcaattgcgcaatatgtttacagattcaact
gattttactgagcgatttattcgtaagttaaaacgttctaaatcaaacaaagaatttttt
gagcaattacagcaagctgcaaaagaaagtactaaaacaggaaaaccaattatttaa
DBGET
integrated database retrieval system
