Staphylococcus lugdunensis HKU09-01: SLGD_01339
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Entry
SLGD_01339 CDS
T01177
Name
(GenBank) MiaB family protein
KO
K18707
threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:
2.8.4.5
]
Organism
slg
Staphylococcus lugdunensis HKU09-01
Brite
KEGG Orthology (KO) [BR:
slg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slg03016
]
SLGD_01339
Enzymes [BR:
slg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
SLGD_01339
Transfer RNA biogenesis [BR:
slg03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
SLGD_01339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
B12-binding
Bravo_FIGEY
Motif
Other DBs
NCBI-ProteinID:
ADC87430
LinkDB
All DBs
Position
1380282..1381628
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AA seq
448 aa
AA seq
DB search
MSTVAFHTLGCKVNHYETEAIWQLFKEANYERVDFETNADVYVINTCTVTNTGDKKSRQV
IRRAIRKNPDAVICVTGCYAQTSSAEIMEIPGVDVVVGTQDRHKLLSYIDEFQKERQPIN
GVGNIMKNRTYEELDVPYFTDRTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPKKVVEQ
ATTLVNAGYKEIVLTGIHTGGYGQDLKNYNLAQLLRDLETIDGLERIRISSIEASQLTDE
VIDVIEKSNKVVRHLHIPLQSGSDSVLKRMRRKYTMEHFSERLSKLHKALSDLAVTSDVI
VGFPGETDEEFQETFDFIAKHKFSELHVFPYSSRIGTPAARMDNQIDEDVKNERVHKLIA
LSDQLAKEYASKFEDDVLEVIPEEKGSFHGSLVGYADNYMKVQFDGDESLIGQIVKVKIV
HADYPLNKGEALRVVEHASNLSEQEVLV
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacggtagcttttcatacattaggttgtaaagtaaaccattatgaaacagaagca
atttggcaattatttaaagaagcaaattatgaaagagtagattttgaaaccaatgcagat
gtgtatgttattaacacatgtacggttacaaatactggagataaaaaaagtcgacaagtc
atacgtcgtgctattagaaaaaatcctgatgcagttatatgcgtcactggttgttatgca
caaacatcatcagcagaaattatggaaattccaggcgttgatgttgtagttggtacgcaa
gaccgtcataaattactatcatatatagatgagtttcaaaaagagcgccaacctattaat
ggtgtaggaaacattatgaaaaatcgcacctatgaggaattagatgtaccgtattttaca
gatcgtacacgtgcttcattaaaaattcaagaaggctgtaataatttctgtacattttgc
atcataccatgggctcgaggtttaatgcgttctagagatccgaaaaaggttgttgaacaa
gccacaacgcttgtcaatgcaggttataaagagattgtgctcactggtattcacactggt
ggttacggtcaagacttgaaaaactataatctagcacaactgttacgcgatttagaaacg
attgatggtctagaaagaattcgtatttcttcaattgaagccagtcaactaacagatgaa
gtgattgatgtcattgaaaaatctaataaagttgtccgtcatttgcatattccgttacaa
tcaggttcagatagcgtgcttaaacgtatgcgacgtaaatacacgatggaacatttttca
gaacgtctatcaaaacttcataaagcgttgtcagatttggcagtgacaagtgatgttata
gtaggttttcctggagaaactgatgaagagtttcaagaaacctttgattttatagcaaaa
cataagttttctgaattacatgtatttccatattcttcacgaatcggtacacctgctgct
cgtatggataatcagattgatgaagatgttaaaaatgaacgtgttcacaaattaattgct
ttaagtgatcaattagctaaagaatatgcttctaagtttgaagatgacgtattggaagtt
attcctgaagaaaaaggtagtttccatggttcactggttggttatgcagataactacatg
aaagtacaatttgatggtgatgaatcattgataggtcaaattgtcaaagtaaagattgta
catgctgattatccgctaaataaaggtgaagcattaagagtagttgaacatgcttctaat
ttatctgagcaagaagtactagtgtaa
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