Spirosoma linguale: Slin_0434
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Entry
Slin_0434 CDS
T01156
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sli
Spirosoma linguale
Pathway
sli00521
Streptomycin biosynthesis
sli00523
Polyketide sugar unit biosynthesis
sli00541
O-Antigen nucleotide sugar biosynthesis
sli01100
Metabolic pathways
sli01110
Biosynthesis of secondary metabolites
sli01250
Biosynthesis of nucleotide sugars
Module
sli_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
Slin_0434
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Slin_0434
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Slin_0434
Enzymes [BR:
sli01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
Slin_0434
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-GeneID:
8724162
NCBI-ProteinID:
ADB36498
UniProt:
D2QEE3
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Position
complement(539908..540453)
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AA seq
181 aa
AA seq
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MQVRQTSIQGLIELTPRVFEDERGHFFESYNKPLFESLGLPMDFVQDNQSFSTKGVLRGL
HMQNQPFAQGKLVRVISGQVLDIAVDLRPDSPTFGQYEAFLLDAKRANMAYIPEGFAHGF
VALEDSVFSYKCTNVYNKAAESGIIWNDPDLNIDWGIANPIVSEKDKELKLFREVFPHTV
V
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttcggcaaacatcaatacaaggcctgattgaattaactccacgcgtttttgag
gatgaacgcggccatttttttgagtcttacaacaagcctcttttcgaatctctgggccta
cccatggatttcgttcaggataatcaatccttttcaacgaaaggggttttgcgcggacta
cacatgcaaaaccagccgtttgctcagggtaaactggtacgggttatcagtggtcaagta
ttggatattgccgttgatttacggcccgattcgccaactttcggtcagtatgaagccttc
ctgctggatgccaaacgtgccaacatggcttatatacccgaaggatttgcacatggcttc
gtagcgctggaagacagcgttttcagctacaagtgcacgaatgtgtacaataaagctgcc
gagtccggtattatctggaacgacccggatctgaacatcgactggggtattgccaatccg
attgtttccgaaaaagacaaggaattgaaattattccgtgaggtgttccctcacacagtc
gtgtaa
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