Spirosoma linguale: Slin_4229
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Entry
Slin_4229 CDS
T01156
Name
(GenBank) ABC transporter
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sli02000
]
Slin_4229
Transporters [BR:
sli02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Slin_4229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C39
ABC_membrane
ABC_tran
SMC_N
AAA_22
Peptidase_C39_2
DUF3335
Peptidase_C70
RsgA_GTPase
AAA_21
AAA_25
AAA_29
AAA_16
nSTAND3
SbcC_Walker_B
MobB
Zeta_toxin
AAA_30
DUF87
Motif
Other DBs
NCBI-GeneID:
8727988
NCBI-ProteinID:
ADB40214
UniProt:
D2QKP8
LinkDB
All DBs
Position
5099028..5101208
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AA seq
726 aa
AA seq
DB search
MKRFPFIKQLYEMDCGPTSLLMIAQYYGKRFTLHKLKEKAGNNRAGVSISGLANAAESIG
FKTLSARLPFDKFRELAPLPAIAYWQGRHFLVVYKTDRKFIYVSDPARGQLRYTHNEFKS
GWVEQGDIGSVLFVEPTPAFYQYEEDKVTQDSGWEYIFNYIKPFKGYIFQLFLGMLLGSL
LMLVFPFLTQSIVDVGINTNNIGFVNLILLAQLMLTISRTSVEFIRSWLLLHISSRLSIN
ILADFLIKMMKLPISFFDTKMTGDLLQRIGDHRRIESFLSSQTLSLIFSLFNLLIFSAIM
IYYNLTIFGVFVAGSIIYMFWVLSFMNRRRRLDFRMFDQQSAAQSNIIQLITSISEIKQQ
NSERVKRWEWEHLQARQFRINLYKLSLNQIQDAGSMLINETRNIFITYLTVRSVMNGDIT
FGTMLSIQYIIGQLNGPILTFIGFMHSFQDAQISLERLQEIYKQPDEEPDPSSKITRLPA
DQSLSLDNISFSYPGIQQPVIESLSLYIPAGKTTAVVGSSGSGKTTLIKLLLKYYPPTSG
EIRLGNVNLNSVSIRLWRDQCGVVLQDGVLFSDTIARNIAVADDEIDWERLEYACKTANI
ASFIETLPQSYRTKIGSEGQGLSQGQKQRILLARVVYRNPAIVILDEATNALDANNERTI
LANMNEFLHTKTVVVVAHRLSTVINADQIVVLNQGRIQECGTHDELILKHGAYFQLVRNQ
LSLGTD
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagatttccttttattaagcagttgtatgagatggattgtggccctacctcatta
ttaatgatagcccagtattacggaaaacgatttactcttcacaaacttaaagaaaaagca
gggaacaatcgggccggcgtttccattagcggattggctaatgctgctgaaagtattggc
tttaaaacattatcagctcgtttacccttcgacaagtttcgggaattagcgccccttccg
gctattgcttattggcagggaagacacttcttggttgtttataaaacagatcgaaaattc
atttatgtttcagatcctgcccgcggtcaactacgttatacccacaatgaatttaaaagt
gggtgggtagagcagggtgacattggaagtgtattatttgttgagcctacacccgctttt
tatcaatatgaagaagataaagtaacacaagattcgggatgggaatatatatttaactat
atcaagccatttaaaggatatatttttcaattgtttttaggtatgctgcttggcagtcta
ctgatgctagtatttcccttcttaactcagtcgattgtcgatgtaggaattaataccaat
aatattggatttgtaaacctgatactattagcgcagttgatgcttactatcagtcgaacg
agtgttgagtttattagaagttggctgttattacacattagttctcggctaagcatcaat
atcttagccgatttcctcattaaaatgatgaaacttccaatttcatttttcgacaccaaa
atgacaggagacctactgcaacggattggggatcatcgtcgtatagaatcatttttatca
tcccaaacgctcagccttatcttttcacttttcaatctgctcatctttagtgctataatg
atatactacaacctcactatttttggagtttttgtagctggtagtattatatatatgttc
tgggtgttatcgttcatgaatcgacggcgtagacttgactttcgtatgtttgatcagcag
tcggcagcacagtcaaacattatacagctgattacgagtattagcgagattaaacaacaa
aacagtgaacgcgttaagcgttgggagtgggagcatttacaagctcgtcagttccgcatc
aatctttacaaattatctttaaaccaaatacaagatgcagggtcaatgctaattaatgaa
acgagaaatatttttatcacttatttaactgtccgttcagttatgaatggggacattaca
tttggaacaatgctctcaattcaatatatcatcgggcagcttaacgggcctattttaacg
tttataggcttcatgcactcgtttcaggatgcgcaaattagtttagagcgtcttcaggaa
atatataaacaacccgatgaagaacccgatcctagctcaaaaattacccgtcttcctgct
gaccagtcgctatctcttgataatatctcattttcttatccaggcattcaacagcctgta
atagagagccttagcctttatattccagcaggtaaaactacagcagttgttggatcaagt
ggtagcggtaaaactacattgatcaaactattacttaaatattacccccccacaagtggt
gaaattaggcttggtaatgttaacctaaatagtgtcagcattcgtctctggcgcgaccaa
tgtggtgttgtattacaagatggtgtactttttagcgatactattgcgcgtaatattgct
gtagcagatgatgaaattgactgggaacgtcttgaatatgcttgtaaaacagctaatatc
gcatcattcattgaaacattaccacaaagctatcgtaccaaaattggtagtgaagggcaa
ggactaagtcaaggccaaaaacagcgtatcctacttgctcgtgttgtgtatcgaaacccc
gcaatagttattctcgacgaagctaccaatgcccttgacgcgaataatgagcgtacaatc
ttggcgaatatgaacgagtttctacacaccaagacggtagtagtagtagcacaccgactt
agcacagttattaatgctgaccaaattgtcgtacttaatcagggacgtatccaagaatgc
ggaacccacgacgaacttatacttaaacatggtgcttactttcaattagtccgcaaccaa
ttatcactaggtacagattaa
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