Spirosoma linguale: Slin_5757
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Entry
Slin_5757 CDS
T01156
Name
(GenBank) Superfamily I DNA and RNA helicase and helicase subunits-like protein
Organism
sli
Spirosoma linguale
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
DUF4011
AAA_30
AAA_19
SLFN-g3_helicase
AAA_16
nSTAND3
DEAD
ResIII
Viral_helicase1
AAA_25
MTES_1575
PhoH
AAA_22
UvrD_C_2
CbiA
UvrD-helicase
ABC_tran
IstB_IS21
FtsK_SpoIIIE
P-loop_TraG
Helicase_RecD
NACHT
Mg_chelatase
MeaB
AAA_7
RNA_helicase
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
8729532
NCBI-ProteinID:
ADB41722
UniProt:
D2QSE0
LinkDB
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Position
7003179..7007270
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AA seq
1363 aa
AA seq
DB search
MRYNPAYQKNPVEIPVQTVLKTFRRRLTNLSSRNRSLLLTSLPAGQFLDLQETDFLLNKP
AFSIITDLIARKGSISLCDVLDPRQERSNEVSQKLRRIDRTARFIEEERGTEDLYVGWPF
VKGKFMDDSVVHGPLLFFPVQIEQQGKGWKLTRRGDELAFLNPTLLMAYGQFNQVKLTDE
IIEKSVDDFDRDPLVFRTQLYEWLKTSPLELNFNQELFTDKLQFFNKQSAKDLSQLERTG
ELKLYPEAVLGIFPQAGSFLVPDYEGLISRSEGFLRSQELGARSEEPFGGEGFSNSLFSF
LLPNGSLPPDGSSLLAPRSSLLKEKHLHTPLPMDASQETAVRAVKEGQSLVVQGPPGTGK
SQLIANLMADAAASGKRVLLVCQKRAALDVVQHRLEEVGMAPFLALVHDFQNDRRALFAQ
IASQIEQIDAYRQQNNGLNAVLLERDFDVESRRIDDTIAELQAFKSALFDTAESGVSAKE
LYLKSPSGEGYQQLIDLSDSYPQFRLDNVDNYRQRLANYTAYQQALGPDHSWAERVNFSD
FTNADLSKADWVIVHWEQTRQTTVDQMTSLLGRSLPLSELLYWQAHDWDLTALLRFLDAP
DATQLWETTRYLLANATHPALTIDETRFEHLAISWEEATDSPGPETSLPTPDLRAFRDIL
ADALTARSSWVSWNWWQLTHSGKTQLQTVISANGLTLSEPDLNTLATKINQRIKLEAIRH
EANPLLAGLPLPEAPGSLRLLHRARHLAERLTTLNLLRQLPGPLWQTPVQFAESVRMMMQ
LAATVTQQQAESARYLTADQLVKIWEDSAYATELRRKLRDDFDLLVEADRLQAGFSDAEK
TVIDQLKDYEPARWPVIFMNSLRAAWLDHIERLYPELRAVSSLKMNQLEQTLQESIRRKQ
ALSRENLLVKLREQTYRNLTFNRLNNVVTYRDLQHQVTKKRSVWPVRKLMESFSDEVFKL
VPCWLASPESVSAMFPLREGLFDLVIFDEASQCFAENGIPAMARGKQVVITGDNQQLRPS
DLYRTRLDDAELNEETPVALEVESLLELAAQYLPQVSLTEHYRSHSLDLITFSNEHFYQN
KLSLLPHFDDINRREPAIRYMNVKGVWQQNTNQAEAEAVLALLDQLAVELPGRSIGIVTF
NYPQQQLIQDMLEGSVTGQPQHAEPPRTYPASLFVKNIENVQGDERDIIIFSVGYAPDER
GRLAMQFGSLNAKGGENRLNVAVTRARERVYVVTSLWPEQLTVADTANDGPRLLKAYLAY
ALDVAQERFRPMPKPQQALPSGTLLKDKLAVQHTNWQPELPFADLTVKATDDTYESIVLT
DDDAYYQQTTKQAHAYLPMALQGRKWPFERVWSREFWRGKPPL
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
ttgcgttataatcctgcctatcagaaaaatcctgtggaaatcccggtccagactgtacta
aagacattccgtcgacgcttaaccaacctcagcagccgtaatcggtcgcttttactgaca
agcttacccgcaggtcagtttctggacttacaggaaacggatttcctgctcaacaaaccg
gccttttccatcattaccgaccttattgctcggaaagggtcaatttcgttgtgcgatgtg
ctcgacccacgccaggagcgcagcaacgaggtgagccaaaagctacgacgtattgaccgc
accgcccgatttatcgaagaggagcggggtacggaagatttatacgtgggctggccgttt
gtgaaggggaaatttatggacgactcggtcgttcacggaccgctcctgtttttccccgtt
cagattgagcagcagggtaagggctggaaacttacgcgccggggtgatgaactggccttc
ctgaacccaaccttgttgatggcctacgggcaatttaaccaagtgaaactgacagacgag
atcatcgaaaaatcagtcgacgattttgaccgagacccgcttgtattccgtacccagctt
tacgaatggctcaaaaccagcccgctcgaactgaatttcaatcaggagcttttcaccgat
aaacttcagtttttcaataagcaaagtgccaaagacctctcccagctcgaacgcaccggt
gagttaaagctctaccccgaagccgtcctgggtatcttcccgcaggcaggatcgttcctt
gtcccggattatgaagggctcatttcaaggagcgagggctttttaaggagccaggagtta
ggagcgaggagtgaggagccattcggtggtgaagggttttccaactcacttttttctttt
ttgctcccgaatggctccttgccgccggatggctcctcactcctcgctcctcgctcctcg
ctccttaaagaaaaacacctccacacccccctgcccatggatgcatcgcaggagacggcg
gtgcgggcagtgaaagaagggcagtccctggtggtgcagggaccaccgggaacggggaag
tcgcagttgatcgcgaatttgatggccgatgccgcagcatccgggaaacgtgttttgctt
gtttgccagaaacgggctgcgctggacgttgtgcagcatcggcttgaagaagtgggcatg
gctccctttctggcattggtacatgattttcagaatgaccgacgggcccttttcgcccag
attgcaagccagatcgagcagatcgacgcctatcgccagcagaataacggattgaacgcc
gtcctgctggagcgtgattttgacgtggagagccgtcgcattgatgacaccattgccgag
ttacaagctttcaagtcggcgctgttcgacaccgctgaaagtggcgtctccgccaaagag
ttgtacctgaagtcgccttccggtgagggttatcaacagttgatcgacttgagcgatagt
tatccacagtttcgtttggataatgtggataactatcggcaacgtttagccaattacacg
gcttatcaacaggcattaggccctgaccatagctgggcggagcgggtcaacttttctgac
tttaccaatgccgacttaagcaaggctgattgggtaattgtacattgggagcaaacccgg
caaacaaccgttgaccaaatgacgagtttgttaggtcgttcgcttccacttagtgaactc
ctttactggcaggcacacgattgggatttaacggcccttctgcgttttttggatgcgcca
gacgccacccagttatgggaaaccacccggtatttactcgccaatgctacccacccggcg
ctaaccattgatgaaacccgttttgagcatctggcaatcagttgggaagaagctaccgac
tcgcccggccccgaaacgtctttgccaacgcctgacctgagagccttccgggatatactg
gccgatgcactcacggcccgctcctcgtgggtgagctggaactggtggcagttaacgcat
tcgggaaaaacacagcttcaaacggtcatctcagctaatgggttgacactttccgagccg
gatttaaacacgcttgccacgaaaataaaccagcgaataaagctcgaagccatccggcat
gaagctaatccgttgctggccggactaccgctccctgaagcgccgggaagtttacggctg
ctgcatcgggcgcgtcacctggccgagcgcttgactacgcttaatctactgcgtcaactg
ccgggaccgctttggcaaacaccggttcaattcgcggaaagcgtgcggatgatgatgcaa
ctcgcagctacggttacgcagcaacaggcagaatcggctaggtatctcacggctgatcag
ctagtgaaaatatgggaggacagtgcctatgcaacggaacttcgtcggaaactgcgggat
gactttgatttactcgttgaagcggatcggttgcaggctggtttttcagacgcggagaaa
acggttatcgaccaactgaaagactatgagcccgcccgatggccagttatttttatgaat
agtttgcgggccgcctggctcgatcatattgagcggctatatcctgaacttcgagccgtg
tcgtcgctcaaaatgaatcagcttgaacagacgttgcaggagagtatccggcggaaacag
gcgctaagccgggaaaatctgctggttaaacttcgcgagcaaacgtatcggaatctgacc
ttcaaccgcctgaacaacgtcgttacctaccgtgatctgcaacatcaggtgaccaaaaaa
cgcagtgtgtggccggtgcggaaactcatggaatccttctccgacgaagtgtttaagctg
gtgccttgctggctggcctcgcccgagtcggtatcggcgatgtttccgcttcgagagggc
cttttcgatctggttattttcgacgaagcctcgcagtgttttgccgaaaatggcatcccg
gccatggcgcggggtaagcaagttgtcataacgggcgataaccagcagcttcgcccgagc
gatctgtaccgaacgcgtcttgacgatgcggaactgaacgaagaaacgccggtcgcgctt
gaggtagaatcactgctcgaattagcggctcagtacctgccgcaagtgtcgctgacggaa
cattaccggagccattcgctcgatctgattaccttctcgaacgaacatttttaccagaac
aagctgtcactactgccgcatttcgacgacattaaccggcgcgaacctgccatccggtat
atgaacgtaaagggcgtctggcagcaaaataccaaccaggccgaagcggaggcagttctg
gccctcctcgatcaactggccgtcgagcttcccggtcgttccattggtatcgttacgttc
aactatccccaacagcaattgattcaggacatgctggagggaagtgtaactgggcaacct
cagcatgcagagcccccacgtacctatccggcttcactctttgttaaaaacatcgaaaac
gtacaaggtgatgaacgggatattatcattttctccgttggctacgccccggatgagcgc
ggtcgtttggccatgcaatttggtagcctgaacgctaagggtggcgaaaaccgacttaac
gttgctgtaacccgagcgcgggaacgggtatatgttgttacgagtctgtggcccgaacaa
ctgacagttgccgatactgccaacgacggcccacgtttgttaaaagcttatctggcctac
gcactcgatgtagcgcaggagcgtttccggccgatgcccaaaccacaacaggctttgccg
tcgggtacgttattgaaagataagctagccgttcagcacaccaactggcaacctgagctt
ccttttgccgacctgacggtgaaagcaacagatgatacgtacgaatccatcgtcctgacc
gacgatgacgcctattatcaacagactacgaagcaggcccatgcctatctgccgatggct
ttacagggacgtaagtggcctttcgagcgtgtttggagccgtgagttctggcggggaaaa
cctccgttataa
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