Streptomyces liangshanensis: HA039_08170
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Entry
HA039_08170 CDS
T07519
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
slia
Streptomyces liangshanensis
Pathway
slia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HA039_08170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slia03019
]
HA039_08170
03400 DNA repair and recombination proteins [BR:
slia03400
]
HA039_08170
Enzymes [BR:
slia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HA039_08170
Messenger RNA biogenesis [BR:
slia03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HA039_08170
DNA repair and recombination proteins [BR:
slia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HA039_08170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_30
Pribosyltran
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QIQ02283
UniProt:
A0A6G9GVI1
LinkDB
All DBs
Position
1938072..1940243
Genome browser
AA seq
723 aa
AA seq
DB search
MTNEDRAALRASADSVLARLVGDATGEATLREDQWRAIEALVADHRRALVVQRTGWGKSA
VYFVATSLLRARGAGPTVIVSPLLALMRNQVDAAARAGITARTINSSNTEEWETIQDEVV
AGEVDVLLVSPERLNNPDFRDQVLPRLAAATGLLVVDEAHCISDWGHDFRPDYRRLRTML
AELPSGVPVLATTATANARVTADVAEQLGTGAGTDALVLRGPLDRESLSLHVLRLPDAAH
RLAWLADHLTELPGSGIIYTLTVAAAEEVTAYLRQCGHTVASYTGRTENAERQQAEDDLL
ANRVKALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVDHAEVLLLPGKE
DEAIWQYFASVAFPPEELVRRTLDVLGHAAKPLSLPALEPLVELRRTRLETMLKVLDVDG
AVHRVKGGWTATGQPWIYDTERYAWVARQRGAEQQAMRDYASADGCRMEFLRRQLDDEQA
APCGRCDNCAGVRFQDKVSAGALDAARGELGRPGVEVEPRKMWPTGLAAIGVDLKGRIPQ
GELSYPGRALGRLSDIGWGNRLRPILAPQASDGPVSDEVVNAVVSVLADWAKGPGGWASG
DEDAPARPVGVVTVASHGRPQLVGSLGRRISEVGRMPLLGTVEYGPAAADTAVSRTNSAQ
RVRALHRTLTVGPALAEALASAGGPVLLVDDLSDTGWTLAVAARLLRRAGAPGVFPLVLA
VQA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacgaagaccgcgcagctctccgggcctcggccgactccgtcctcgcccgtctc
gtcggtgacgccaccggcgaggccacgctccgcgaggaccagtggcgggccatcgaggcg
ctcgtggccgaccaccgcagggcgctggtcgtgcagcggacgggctggggcaagtccgcg
gtgtacttcgtggcgacgtccctgctgcgggcccgcggcgcgggcccgaccgtgatcgtc
tccccgctgctggcgctgatgcgcaaccaggtggacgcggcggcgcgggccggcatcacg
gccaggacgatcaactcgtcgaacacggaggagtgggagacgatccaggacgaggtggtg
gccggcgaggtcgacgtgctgctggtcagccccgagcggttgaacaatccggacttccgg
gaccaggtgctgccccggctcgccgcggccacggggctgctggtggtcgacgaggcgcac
tgcatctccgactggggccacgacttccggccggactaccggcggctgcgcacgatgctc
gccgaactgccctcgggcgtcccggtcctggccaccacggccacggcgaacgcccgcgtg
acggcggacgtggccgagcagctcggcacgggcgccgggacggacgcgctggtgctgcgg
gggccgctggaccgggagagcctcagcctgcacgtgctccggctgcccgacgcggcgcac
cggctggcctggctggccgaccacctgacggagctgccgggctccgggatcatctacacg
ctcacggtcgcggcggcggaggaggtcaccgcgtacctccgccagtgcggccacacggtc
gcctcgtacacggggcgtacggagaacgcggagcgccagcaggcggaggacgacctgctg
gccaaccgggtcaaggcgctcgtggcgacctcggcgctcggcatgggcttcgacaagccc
gacctggggttcgtcgtgcacctgggctccccgtcctcgccgatcgcgtactaccagcag
gtgggccgggcggggcgcggcgtggaccacgccgaggtgctgctgctgcccggcaaggag
gacgaggcgatctggcagtacttcgcgtcggtggccttcccgccggaggagctggtccgc
cgcacgctcgacgtgctgggccacgcggcgaagccgctgtcgctgccggccctggagccg
ctggtcgagctgcgccgcacccgtctggagacgatgctcaaggtcctcgacgtggacggc
gcggtgcaccgggtgaagggcggctggacggcgacggggcagccgtggatctacgacacc
gagcggtacgcgtgggtggcgcgccagcgcggcgccgagcagcaggcgatgcgggactac
gcgtcggcggacggctgccggatggagttcctgcggcggcagctcgacgacgagcaggcg
gccccctgcggccggtgcgacaactgcgccggggtgcgctttcaggacaaggtgtccgcc
ggcgccctggacgcggcgcgcggcgagctgggcaggccgggggtggaggtggagccccgc
aagatgtggccgaccggcctcgccgccatcggggtcgacctcaagggacgcatcccgcag
ggtgaactgtcctacccggggcgggcgttgggacggctctccgacatcggctggggcaac
aggctgcgcccgatcctggccccgcaggcgtcggacggcccggtgtcggacgaggtggtg
aacgcggtggtgagcgtcctcgccgactgggccaagggcccgggcggctgggcgtccggc
gacgaggacgcgccggcccggccggtgggagtggtgacggtcgcctcgcacggcaggccc
cagctggtcggttcgctcggccgccggatctcggaggtgggccggatgcccctgctcggt
acggtggagtacggtcccgccgcggcggacaccgccgtgtcgcgtacgaacagcgcccag
cgggtgcgggccctgcaccggacgctgaccgtgggacccgcgctggcggaggccctggcg
tcggcgggcgggcccgtcctgctggtcgacgacctctcggacaccggctggacgctggcg
gtcgcggcccgcctgctccgcagggccggagcaccgggagtgtttccgctggtcctcgcg
gttcaggcgtga
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