Sodalis ligni: GTU79_16250
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Entry
GTU79_16250 CDS
T08321
Symbol
cmoB
Name
(GenBank) tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
KO
K15257
tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
Organism
slig
Sodalis ligni
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slig03016
]
GTU79_16250 (cmoB)
Transfer RNA biogenesis [BR:
slig03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
GTU79_16250 (cmoB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_9
Methyltransf_23
Methyltransf_25
Methyltransf_31
Methyltransf_12
Methyltransf_11
CMAS
PCMT
Motif
Other DBs
NCBI-ProteinID:
QWA09038
LinkDB
All DBs
Position
3492619..3493590
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AA seq
323 aa
AA seq
DB search
MTDFGDFYQLIAKGPLSPWLNTLPAQLSAWQQESLHGKFRQWFNAVERLPVMTPARLDLL
HGVTAQGETPLAAGQKEGIEALLRQLMPWRKGPFSLYDIEIETEWRSDWKWERVLPHIGP
LAGRLILDVGCGSGYHLWRMVGAGARLAVGIDPMQLFLCQFEAVRKLLGGDLRAHLLPLG
IEQLPDLRAFDTVFSMGVLYHRRSPLDHLLQLRNQLADDGELVLETLVIEGDDRQVLVPG
ERYARMRNVYFIPSVNALTAWLEKCGFGQIRLVDMTATSTEEQRRTPWMTSESLEDFLHP
DDPRKTVEGYPAPLRAIMVARKA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaccgattttggtgatttttatcagctgattgccaaaggtcccctcagcccctggctc
aataccctgcccgctcagttaagcgcctggcagcaggaatccctgcacggcaaattcaga
cagtggtttaacgctgtggaaagattgccggtgatgacgccggcgcggctcgatttgctg
cacggcgtcaccgcccagggcgagacaccgcttgccgcaggccagaaagagggtattgaa
gccttgctgcggcaattgatgccctggcgcaagggtcctttttccctttacgatattgaa
atagagacggaatggcgttcggattggaaatgggagcgggtcttgccccatatcggcccc
ttggccggacggctgatcctggacgtgggctgcggcagcggttatcacctctggcgtatg
gtgggcgccggcgcgcggctggcggtgggaatcgatccgatgcagctgtttttatgccag
ttcgaggcggtgcgtaaactgctcggcggcgatctgcgggcgcacctgttgccgttgggc
atcgagcaattaccggatctgcgggcgtttgatacggtattttccatgggcgtgctttat
catcgccgctcgccgctggatcatttgttgcagttgcgaaaccaattggcggatgacggc
gaactggtgctggaaaccctggtgattgaaggggatgaccggcaggtgcttgtgccggga
gaacgttatgcccggatgcggaacgtgtatttcatcccctcggtaaatgcattgacggcc
tggctggaaaaatgcggcttcggccaaatccggctggtggatatgacggcaacctccacc
gaggagcaacgccgcaccccctggatgaccagcgaatcgctggaggattttcttcacccg
gacgacccgcgtaaaacggtggagggttaccccgcgccgctgcgggccatcatggttgcg
cgcaaagcctga
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