Sulfuricaulis limicola: SCL_0085
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Entry
SCL_0085 CDS
T05241
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
slim
Sulfuricaulis limicola
Pathway
slim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SCL_0085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slim03400
]
SCL_0085
Enzymes [BR:
slim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SCL_0085
DNA repair and recombination proteins [BR:
slim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SCL_0085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
PriA_CRR
PriA-like_WH
AAA_30
HypA
zinc-ribbons_6
LysW-like_globular
AAA_19
TrwB_AAD_bind
zinc_ribbon_2
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
BAV32409
UniProt:
A0A1B4XC63
LinkDB
All DBs
Position
95147..97354
Genome browser
AA seq
735 aa
AA seq
DB search
MVAMPRIYQVAIPTPLYRLFDYLAVPGVARFPPGVRVRVPFGRRELVGVVMGEVAQSELP
ANRLKSITQPLDDSAILPPSMLSLLQWAADYYHHPLGEVIHTALPVYLRQGRAPVASGVK
VWSLTPAGKAVDPQTLKRAPAQKQVLEALAADADGLDAEQLAKVSQRSAAALKALRAKGW
VSSHQRETRPVISGDLQTAPELNPDQKSAVAGILAGLGGFRPFLLHGVTGSGKTEVYLGV
IEQVLAQGKQALVLVPEISLTPQLVGRFARRFRAPIALLHSGLNEQERLSAWVRASAGRA
SIVLGTRSAVFTPLMHPGLIVVDEEHDASYKQQDGFRYSARDVAVMRAAREKIPVILGSA
TPSLESLKNARQGAYTLIELPERTGTAVMPQVRLLDMRRLKPSEGLSLPLREALAARLEK
GEQSILFLNRRGFSPVWMCFDCGWVAPCKRCDARLTLHHRKQKLLCHHCGAEQEVVKSCP
SCQGANLHPLGEGTERVEGALEKFFPRARIERIDRDSTARRGALEEKLRRVHAGEADILV
GTQMLSKGHDFPNVTLVGILNADQGLYGTDFRSGERLFQLIMQVSGRAGRADKPGEVLIQ
TWHPEHPLFAALQRHDFHGFAEFALNERRETGYPPYTHLALLRAEAPAPGAALEFLRAAR
ALAVQLSPGKDVQLLSPAPAPMERRAGRYRAQLLVQSGQRAPLHEFLAQWVRQLTEAKFA
KKTRWSLDVDPADMY
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggtagccatgccgcgcatctatcaggtcgcaattccaacaccgttatatcgcctgttt
gattatttggccgtgcctggtgtggccaggttcccgccaggcgtgcgcgtgcgcgtgccc
tttggccggcgcgaactggtcggggtggtgatgggtgaggtggcgcaaagcgagttgccc
gccaaccggctgaaaagcatcacacaaccgctggacgacagcgccatcctcccgccatcc
atgttgagcctgctccaatgggcggcggattattaccatcatcccctcggcgaggtcatc
cacacggccctgccggtgtatttgcgtcagggacgtgcgccggtcgccagcggggtgaag
gtgtggtcgctcacgcccgccggaaaggcggtggatccgcagacgttgaagcgcgcgccg
gcgcagaaacaggtgctcgaggcgctggcggcggatgcggacggtctcgatgcggagcag
cttgccaaggtctcgcagcgctcggcggcggcgctcaaggcgctgcgcgccaaagggtgg
gtgagcagtcaccaacgtgagacgcggcccgtgatcagcggggatttgcaaaccgcgccg
gaactcaatccggaccagaaatccgccgtggccggcatccttgccggtctcggcggattt
cgtcctttcctgctgcatggcgtgaccggcagcggcaagaccgaggtgtacctgggcgtg
atcgagcaggtgctggcgcagggcaagcaggcgctggtgctggtgccggagatcagcctg
acgccgcagctggtgggtcgtttcgcgcggcgttttcgtgcgccgatcgccctgctgcat
tccggcctcaacgaacaggaacgcctgagcgcctgggtccgggccagcgccggccgcgcg
tccatcgtgctcggcacgcgctcggcggtattcacgccgctgatgcatcccggtcttatc
gtcgtggacgaggaacacgatgcctcgtacaaacagcaggacggtttccgctattcggcc
cgcgacgtggccgtgatgcgcgccgcgcgcgagaaaataccggtcatactcggctcggcc
acgccctcgctggagagcctcaagaacgcgcgccaaggcgcctataccctgattgaattg
ccggaacgcactggaaccgcggtcatgccacaggtgcggctgctcgacatgcgccggctc
aagcccagcgaaggattatcgttgccgctgcgcgaggcgctcgcggccagactcgaaaaa
ggcgagcagagcatcctgtttctcaaccgccgcggcttctctccggtgtggatgtgtttt
gactgcggctgggtcgccccgtgcaagcgctgcgacgcccggctcaccctgcatcacagg
aaacagaaactgctttgccatcattgcggcgcggaacaggaagtcgtcaagagttgtccc
tcctgccagggcgccaacctgcacccgctcggcgagggcacggaacgggtcgagggcgcg
ctggaaaaatttttcccgcgggcgcgcatcgagcgcattgatcgcgacagcaccgcgcgc
cgcggggcgctcgaggaaaaactgcgtcgcgtccacgccggcgaggccgatatcctggtc
gggacccagatgctgtccaaggggcatgacttccccaacgtcacgctggtcggcatcctc
aacgccgaccaggggttgtacgggaccgatttccgttcgggtgaacggctgttccagttg
atcatgcaggtcagcggccgcgccggccgcgccgacaagccgggcgaggtgctgatccag
acctggcatccggagcatcccctgttcgcggcgttgcagcgccatgactttcacggcttc
gccgagttcgcgctcaacgagcgccgcgagaccggctacccgccttacacccatctggcc
ctgctgcgcgccgaagcgcccgcgcccggcgcggcgctcgaatttctgcgcgcggcgcgc
gcgctggcggtgcaactgtcgcccgggaaggacgttcagctattgtccccggcgccggca
cccatggagcggcgcgccgggcgttaccgcgcgcaactgctggtgcaatccggccagcgc
gcgccgctgcacgaattcctggcgcaatgggtgcggcagctgacggaggcgaagttcgcc
aagaagacgcgctggtcgctggatgtcgatccggcggatatgtattaa
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