Sulfuricaulis limicola: SCL_1067
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Entry
SCL_1067 CDS
T05241
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
slim
Sulfuricaulis limicola
Pathway
slim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCL_1067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slim03019
]
SCL_1067
Enzymes [BR:
slim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SCL_1067
Messenger RNA biogenesis [BR:
slim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SCL_1067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
BAV33381
UniProt:
A0A1B4XF01
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All DBs
Position
1057871..1059091
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AA seq
406 aa
AA seq
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MRDLMLGREPKDFDVVTDARPEQIRKLFHNARVIGRRFRLVHVRFGWDIIEVATFRAIPR
DISEEPVSTEEEAEGEDVENDSPAEAPDHNVFGSQEEDAVRRDFTVNALYYDVHDFSVID
YVGGVADLKAGILRVIGDPETRYREDPVRMLRAVRFAAKLGFNLEDRTAAPIRDLAPLLA
SVPAARMFEEVLKLFHGGYALETYELLRHYGLFQYLFPLTEKSLEHEEDGFPVTLVPRAL
ANTDARVNEDKPVTPAFLFAAMLWEPVREQMGEYIVRGMNSHDAMFRAAEDVLHEQLRHI
TIPKRFSVPMREIWSMQGRLDRRAGQQAFRLLESKRFRAAYDFLLLRAETGEADQGLADW
WTRFQSVGEEERRIMVAEFAAPGSGGGKRRRRRRRRPSSGQSPRHE
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtgatctcatgctgggtcgtgagcccaaggatttcgacgtcgtcaccgacgcgcgg
cccgagcagatccgcaagctgttccacaacgcacgcgtgattggccggcggtttcgcctg
gtgcacgtgcgtttcggctgggacatcatcgaggtcgccaccttccgcgccattccccgc
gatatttccgaggaacccgtttcgacggaagaagaagcggagggggaggatgtcgaaaac
gattctccggcagaggcgccggatcacaatgttttcggctcccaggaagaagacgccgtc
cggcgcgatttcaccgtcaatgccctgtattacgacgttcatgacttcagtgtcatcgat
tatgtcgggggtgtcgccgatctcaaggctggcatcctgcgcgtgatcggcgatcccgag
acacgctaccgggaagatccggtacgcatgctgcgcgcggtgcgtttcgccgccaagctg
ggcttcaatctcgaggacaggaccgccgcgcccatccgcgatctcgcgcccttgctggcg
tccgtgccggcggcgcggatgttcgaggaagtcctgaaactgtttcatggcggctacgcg
ctcgaaacctacgaattgctgcgtcactacggcctgttccagtatttgttcccgctgacg
gagaaaagcctcgaacacgaagaggacggatttcccgtgacgctggtgccacgcgcactg
gcgaatacggatgcgcgcgtgaacgaggacaagccggtaacgccggcgtttctgttcgcc
gccatgctgtgggagccggtgcgggaacagatgggagaatatatcgtgcgcggcatgaac
agccatgacgccatgttccgcgccgcggaggacgtgctgcacgagcagctgcggcacatc
accattccgaagcgtttcagcgtgccgatgcgtgaaatctggagcatgcagggtcgcctc
gatcgccgtgccggccagcaggcattccgtctgctggagagcaagcgctttcgcgcggcc
tatgattttctgctgttgcgcgccgaaaccggcgaggccgatcagggcctggccgactgg
tggacgcgtttccagagcgtgggcgaggaggaacgccgtatcatggtggcggaattcgcc
gcgcccggcagtggcggaggcaagcgtcgccggcgtcgccggcgccggccatcgtccggg
cagtcgccgaggcatgagtaa
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