Shewanella litorisediminis: JQC75_04490
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Entry
JQC75_04490 CDS
T07182
Name
(GenBank) carbohydate-binding domain-containing protein
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
slit
Shewanella litorisediminis
Pathway
slit00511
Other glycan degradation
slit00520
Amino sugar and nucleotide sugar metabolism
slit00600
Sphingolipid metabolism
slit01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
JQC75_04490
09103 Lipid metabolism
00600 Sphingolipid metabolism
JQC75_04490
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
JQC75_04490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
slit03110
]
JQC75_04490
Enzymes [BR:
slit01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
JQC75_04490
Chaperones and folding catalysts [BR:
slit03110
]
Intramolecular chaperones
Others
JQC75_04490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
CHB_HEX
CHB_HEX_C
Glyco_hydro_20b
Motif
Other DBs
NCBI-ProteinID:
QRH02688
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All DBs
Position
1014715..1017369
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AA seq
884 aa
AA seq
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MKFSLAASAILLALGVSGCSQAPVEPAAVAAGASVLSQASLQAFADGLDVKYRVITNRPD
DNCIKDVAEGRCFQAEIVLTSAIDFDGRDFEIYYSQMRPVQSVQSTDFVIEHVKGDLHRI
KPTERFGGFKANKSQTLAFRGELWQLSETDAMPNYYITSPGLKPVVIASTRLAVEAETGL
EQRPYVEAFSDADKQYRRTDNDKLPWATAAVLFEGNESLVADPAAAAQRIIPAPLSQTLE
AELGTLDLSGGIAIELPQGLDKVAIDAALARLARLGIEEAATGAKLKLVSDDSLDEEAYH
LLIRPEGAEIKAATEAGFAYGLSSLAALIQPGKPVITAQKISDAPRYGFRGMHVDVSRNF
HSKEFMLSLLDQMAAYKLNKLHLHMGDDEGWRLEIDGLPELTEIGSKRCHDLTEDTCLLP
QLGSGPDADVKVNGFYTKADYIEILKYASARQIQVIPSMDMPGHSRAAVKAMEARYRRLA
EAGDIKGAEEYRLIDPQDKTVYSSVQYYDDNTLNVCIESTYHFVDKVIDEIAKLHREAGQ
PLTRYHIGADETAGAWLESPKCEAFIANNDKGVADKSELGAYFIERVANMLHDKGIEPAG
WSDGMSHTRPEKMPAMNQSNIWDVVAYKGHQRAHKQANMGWEVVLSNPEVLYFDFPYEAD
PKEHGYYWASRATNSQKVFGFMPGNLPANAEQWLDIENNPFEADDRKVLDEKGQVISEPM
GAGQAFYGIQGQLWSETIRSDEQAEYMIFPRLLMLAERAWHKPGWEVPYNHEGMLYNQSS
GTFTTEARAQQAADWQQMANTLGHKELAKLDLAGIHYRVPTVGARIEDGKLSANIAFPGL
GIEYREAGGNWQPYQGPVAVTKLPVEVRGVAADGTRKGRALEVK
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttccttagccgcatctgcgattcttctcgccctcggcgtcagtgggtgctca
caagcaccggtcgagcctgctgccgttgccgccggggcttcggtattaagccaggccagt
ttgcaggcctttgccgacgggcttgacgtcaaataccgggtgatcaccaacagacccgat
gacaactgcatcaaggacgtggccgaagggcgctgcttccaggctgaaattgtgctgaca
tcagccattgatttcgacggtcgcgattttgaaatctattacagccagatgcgccctgtg
cagtcggtgcaaagcacagactttgtgattgaacacgtaaaaggcgatttgcatcgtatc
aagccgaccgagcgtttcggtggattcaaggccaataagagccagacactggcgtttcgc
ggtgagctgtggcagctgtctgaaaccgatgccatgcccaattactacatcacatcgccg
gggcttaagccggtggtaattgccagcaccaggctggcggttgaggccgaaaccggcctt
gagcagcgtccttacgttgaagcctttagcgatgccgataagcagtatcgtcgcaccgac
aacgacaagctgccatgggcgacagcggctgtgctgtttgaaggtaatgaatcgctggtg
gccgaccccgccgctgcggcccagcgcatcatccctgcgcctttgtctcaaaccttggaa
gccgagcttggcacgctggacttgtccggcggtattgcgattgaactgccccagggactg
gataaagttgccatagatgctgcgctggcgcgtcttgcccgcctcgggattgaggaagcc
gccaccggtgccaagcttaagctggtaagtgatgactcactcgatgaggaagcctatcat
ctccttatccgccccgagggcgccgagatcaaagctgccaccgaagcaggctttgcctat
ggtctgtcatcgctggccgcgcttattcagcccggcaaaccggttatcacggcccaaaaa
atctcagatgcgccaagatatggctttcgcggcatgcatgttgatgtatcccgtaacttc
cattccaaggagtttatgctgagtctcctcgaccagatggcggcctataagctcaacaaa
ttgcacctgcatatgggcgatgacgagggttggcgtctcgagattgacggcctgccggag
ctcaccgaaattggcagcaaacgttgtcatgaccttaccgaagacacctgcctcctgccg
cagctcggcagtggtcccgatgccgatgtaaaggtgaatggcttctacaccaaggctgac
tatattgagatcctcaaatacgcctcagccagacaaatccaggttatcccgtccatggat
atgcccggccacagccgcgctgcggtaaaagccatggaagccaggtatcgtcgtctcgcc
gaagcgggcgatatcaagggcgctgaagagtatcgccttatcgatccgcaagataagacg
gtctatagctcggtccagtattacgacgacaacaccctgaacgtgtgcatcgagtccacc
tatcactttgtcgataaggtaattgatgaaatcgccaagctccatagagaggccggacag
ccgctgacccgttatcacattggcgccgatgaaaccgccggtgcctggcttgagtcgccc
aagtgcgaagcctttatcgccaacaacgacaagggggtggccgataagagtgagctgggc
gcttactttatcgagcgggtggccaatatgctgcacgacaagggcatcgagcctgccggt
tggagtgatggcatgagccatacccgtccggaaaaaatgcccgccatgaaccagagcaat
atctgggatgtggtggcctacaaaggccatcagcgtgcccacaagcaggccaatatgggc
tgggaagtggtgttgtccaatcccgaagtcttgtacttcgattttccctacgaggcagac
cccaaggaacatggctactactgggcgagccgcgccaccaatagccagaaggttttcggc
tttatgcccggcaatctgccggccaatgccgagcagtggctggatatcgagaacaaccca
ttcgaggccgacgacagaaaggttctcgatgagaagggacaggtcatcagtgagcccatg
ggggctggtcaggccttttacggtatccaggggcagctgtggagcgaaaccattcgcagt
gatgagcaggccgagtacatgattttcccccgtctgttgatgctggcagagcgtgcctgg
cataaacccggttgggaagtgccttacaaccatgagggcatgctctataaccagagcagt
ggcacctttaccacggaggcccgagcccagcaggccgccgattggcagcagatggccaac
acccttggccataaagagctcgccaagctggatctggccggtattcattatcgtgtgccc
accgttggcgcccgtattgaggatggcaagctgtcggccaatatcgcctttccggggctt
ggcattgaataccgtgaggccggtggcaattggcagccttatcagggaccggttgcggta
accaagttgccggttgaagtgcgtggtgtggcggcagacggtactcgcaagggccgtgcc
ctcgaagtgaagtaa
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