Shewanella litorisediminis: JQC75_05440
Help
Entry
JQC75_05440 CDS
T07182
Name
(GenBank) 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA
Organism
slit
Shewanella litorisediminis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FabA
ketoacyl-synt
Ketoacyl-synt_C
KAsynt_C_assoc
ACP_syn_III
Thiolase_N
Motif
Other DBs
NCBI-ProteinID:
QRH03583
LinkDB
All DBs
Position
complement(1228645..1234476)
Genome browser
AA seq
1943 aa
AA seq
DB search
MAGRFPGADDLDAFWSLITEGKDAHSPICRDKLGAPVAAYLGEQGKSDRFYCDKGGYLRD
FRFSPEGYAKPADAMATLASQVDEHQLWALDVARMALQSLNSGMDKRRCGVVMGTLSFPT
KASNRAFLPLYHKAVENGLKARLPGFPPLQPFDGQSTLGSQPWLQDTAADASALISDCLG
LEGVSLSLDAACASSVYAIKLACDYLATGKADVMLAGAVSGADPFFISMGFSIFHAFPEH
GLSAPLDKHSGGLYAGEGAGVLVLKRLDDAKRDGDTIHGIIRGVGLSNDGRGQFVLSPAS
KGQIKAFERAYEDAGIAPGAVEVVECHATGTPLGDKVELSSLESFFESRLDGSAPPLIGS
VKSNLTHLLTAAGMPGIIKLMLAMKHKLLPPTVRLTSPISSPKGLFGDDQMVTAARPWPA
KPQNNAAMAGLSVFGFGGCNAHLVLESPDGAEALQALSSPDVSHSASDSFGIEGLAGHFG
AATHVGELATLITDNKHALVPLPEGRWKGLEHLSAGSHDSAIQHVGGFIDGFELDFLRFR
LPPHPGDRLVAQQLLLMKVADEAIRDADLKPGSKVAVLVAMETELELHQFRGRVNLHTQI
ADSLARAGIVLSDDEYQALEQLAMDAVLPSASLNQYTSYIGNIMASRVASQWDFSGPAFT
LSAGELSVARALEVADNLCATQQLDAVVVAAVDLAASAEKVWHYGSALGAMGLPPGEGAG
ALVLKAGSKGRYGALTPPTFSRPDQANVEDITEHSPSCKLGRMLNVSGHSASARLGHCFA
AANMASLQHSLLSLTLKGHGAESKAAVLLDGAMHSARVELRQTKAQQAALSQRLTEGLHA
PAGKQLLQRIQLGGRDIRGHILSGELPCEGSIRAKLAQNTALTSNALESTASNATEQPPS
QKNTEVPMTQNKTPQSPGYQPSSPGISAGISANSGSSINISQTGPVVQNRLAAMEAHQAF
LQSREAGLKLARALMADITGDAAGISNAAIAAAVSENKPLQVTLPKVEISLPEVQRSQSK
AELSLPKPELATPAAVEQTPLSQAVKDCIWDYADLVEYAEGDIAPVFGPDYAIIDSYKRR
VRLPTTDYLLVSRVTKLDAKLGEYKPSTMTTEYDIPVDAPYLVDGQIPWAVAVESGQCDL
MLISFLGIDLENKGERVYRLLDCTLTFLGDLPRGGDTLRYDISINNYARNGDTLLFFFSY
ECFVGDRLILKMDGGCAGFFTDAELADGKGVIRTEDEIKQRSAAMANPRSFTPLIACDTT
AFGYDKVSRLLAADVAGCFGPSHDLGFHQPSLCFASEKFLMIEEVSKVDVKGGAWGLGLI
EGHKQLEPDHWYFPCHFKDDQVMAGSLMAEGCGQLLQFYMLHLGLHKLTKNGRFQPLKDA
PQKVRCRGQVLPQSNRLSYRMEVTDIGLTPSPWAKANIEIILDGKVVVDFQNLGVMLKED
EDCHRYGADNSRVDFPSHNAGVMLKEDEDCHRYGADNSRVDFPSHNTGVMLKEDEDCHRY
GNDNQTAAISDNKALLEGRQASIHAPLMTHEPDLNATPIKGVVPVKHIEAPVTKDYSPKS
ANRIPDSVPFTPWHLFEFATGNIENCFGPEFAVYRGLIPPRTPCGDLQLTTRVVEVKGKR
GDFKSPASCIGEYEVPPKAWYFAENSHPARMPYSILMEIALQPNGFISGYMGTTLGFPGL
ELFFRNLDGEGTLIKDIDLRGKTISNDSCLLSTVMSGTNIIQTFSFALAADGEPFYEGKA
VFGYFKAEALTHQLGLDNGKVTTPWIEAEHLSPDISYNLRDSACALYQAAPGKPHLRLPG
GRLNFVDRVDIVRAGGKAGLGYVYGERTIDPSDWFFRFHFHQDPVMPGSLGVEAIIELLS
SFALDAGLGNEFANPRFNHCLSRVKWKYRGQISPLNRQMSLELHITAIERETGRVTLKAD
AWLAKDGLRIYEISDLALAIEEA
NT seq
5832 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcgttttcccggtgctgacgacctggatgccttctggtcgctgataaccgag
ggcaaagatgcccacagcccaatttgccgggacaaactcggcgcgcctgtggcggcctat
cttggggagcagggtaagagcgaccgcttttactgcgacaagggcggctacctgagagac
tttcgtttttcacccgagggttacgccaagccagccgatgccatggccaccctggcctcc
caagtggacgagcatcagctgtgggccctggatgtggcgagaatggcactgcagagcctt
aactccgggatggataaacgccgctgcggcgtggtgatgggtaccctgtcgtttcccacc
aaagcctccaaccgcgcctttttgcccctgtaccacaaggcggtggaaaatggcctcaag
gcccgtttgcccggcttcccgccgctgcagcccttcgatgggcaaagcacccttgggtca
cagccctggttacaggacacggccgccgatgcctcggcccttatcagcgactgcctgggg
cttgagggcgtgagcctgagcctggatgcggcctgcgccagctccgtctacgccatcaag
cttgcctgcgactatctggccaccggcaaggccgatgtcatgctggccggtgcggtgagc
ggcgccgatccctttttcatcagcatgggcttttccatcttccatgccttcccggagcat
ggcctgagcgcccccctcgataagcactccggcggcctgtacgccggtgaaggcgccggg
gtactggtgctcaaacgcctggatgacgccaaacgcgatggcgacaccatccacggcatt
atccggggtgttgggctgtccaacgatggtcgcggccagtttgtgttaagcccagccagc
aaggggcaaatcaaggccttcgagcgcgcctacgaagacgcaggcatagcccccggcgcc
gtggaagtggtggaatgccacgccacaggtacgccccttggcgacaaggtggagctgagc
tcactggaaagcttttttgagtcgcgcctcgatggcagtgcgccgccccttatcggctcg
gtaaagtccaacctgacccatcttctcaccgccgcaggtatgcccggcatcatcaagttg
atgctggcgatgaagcataaacttctgccgcccacggtgcgcctaaccagcccaatcagc
tcccccaaggggctctttggcgacgaccagatggtcaccgcagcccgcccctggcctgca
aaaccgcaaaataatgccgccatggccggattatcggtattcggctttggtggctgcaac
gcccacctggtgctggaatcccccgatggagcagaagcgcttcaagcattgagcagtcct
gacgtcagccactcagccagcgacagctttggcatcgaaggcctcgccggacacttcggc
gcggcaacccatgtgggcgagctcgcgaccctgataacagacaacaaacacgcccttgtg
ccgctgcccgaggggcgctggaaaggtctcgagcacctgagcgccgggtcccatgactct
gcgatacagcatgttggcggttttatagacggattcgagctggactttttgcgcttcagg
ctgccgccccaccccggcgacagactggttgcccagcagcttttgctgatgaaggtggcc
gacgaggccatccgcgatgcggatctcaagcccggcagcaaggtggcggtgctggttgcc
atggaaaccgagcttgagctgcatcagttccgcggccgggttaacctgcacacccagatt
gccgacagtctggcacgggccggcatagtgctcagcgacgatgaatatcaggcgctggag
caacttgccatggatgcggtgctgccctcggcaagcctgaatcagtacaccagctacata
ggcaatatcatggcctcccgggtggcctcccagtgggacttcagcggcccggcctttacc
ctgtcggcgggcgaactctcggttgcccgcgcgctggaggtggccgacaacctctgcgcc
acccagcagctggacgccgtggtagtggccgcggtggacttggccgccagcgccgagaaa
gtatggcactatggcagcgcccttggcgccatgggtctcccccccggtgaaggggcaggc
gccctggtattgaaggcaggcagcaaaggccgttatggcgcgctcacgccgccaacgttc
agccgccccgaccaggccaatgtagaggacatcacagagcacagccccagctgcaagctt
ggccgcatgcttaacgtcagtggccacagcgccagtgcccgcctgggccactgctttgcc
gccgccaatatggcgagcctgcaacattcgctcctgtctttgacactgaaaggccatggg
gcagagtcgaaagcagcggtactgctggatggcgccatgcacagcgcccgggtcgagctt
cgccaaaccaaggcacaacaagctgccctcagtcagcgcctcacagaagggctgcacgcc
cccgcaggcaagcagctgctgcagcgcatacagcttggcggcagagatattcgcggccac
atactcagcggcgaactgccctgtgaaggctctatccgcgccaagctggcacaaaacact
gcgcttacaagcaatgccctggaaagcacggcatccaacgccactgaacagccgccttcg
cagaaaaatactgaagtaccaatgacacaaaataaaacgccccagtcgcccggctatcag
ccatcgagccccggcatcagcgccggcatcagcgccaatagcggctccagtatcaacatc
agccagaccggacctgtggtccagaatcgtctggcggccatggaggcccatcaggcattc
ttgcaaagccgcgaagccgggctcaagcttgcccgcgccctgatggccgatatcaccggc
gacgcagccggtatcagcaatgccgccatcgccgcggcggtgagcgagaataaacccctg
caagtcaccttacccaaggtggaaatcagccttcccgaggtgcagcgcagtcagtccaag
gcagagctcagcctgcccaagccagagctggcaacaccagccgcagttgaacaaacgccg
cttagccaggcggtaaaagactgcatctgggattacgccgatttggttgagtacgccgag
ggcgatatcgcccccgtatttggccccgattacgccattatcgacagctacaagcgccgg
gtgcgcctgcccaccacagactatctgctggtgtcccgggtcaccaagcttgatgcaaaa
cttggcgagtacaagccaagcaccatgaccaccgaatacgatatcccggtggacgccccc
tatctggtggacgggcaaattccctgggcggtggcggtggagtcgggccagtgcgatctc
atgctcatctccttcctcggcatcgaccttgagaacaagggcgagcgggtctatcgcctg
ctggattgcaccctcaccttcctcggtgacctgccccgaggcggcgataccctaaggtac
gatatctccattaacaactacgcccgcaacggcgacaccctgctgtttttcttctcctac
gagtgcttcgtgggcgataggcttatcctcaagatggacggcggctgcgccggtttcttc
accgacgccgagcttgccgatggcaaaggggttattcgcaccgaggatgaaataaaacag
cgcagtgccgccatggcaaatccacgtagcttcacgccgctgattgcctgcgatacaacc
gcctttggctacgataaggtctcgcgcctgctcgccgccgatgtggcgggctgctttggc
ccaagtcacgatctgggtttccaccagccatcgctttgttttgcttctgaaaagtttttg
atgattgaagaagtgagcaaggtggatgtcaaaggcggcgcctggggcctggggcttatc
gaaggccataagcagcttgagccggaccactggtatttcccctgtcatttcaaagacgat
caggtgatggcaggctcgctgatggccgagggctgtggtcagctgctgcagttttacatg
ctgcatctggggctgcacaagctcaccaaaaacggccgcttccaaccattgaaggatgcg
ccgcaaaaggtgcgctgccgtggtcaggtactgccccagtcgaaccgcctaagctaccgc
atggaagtcaccgacataggtctcaccccctcaccctgggccaaggccaatatcgaaatt
atcctcgacggaaaagtcgtggtggattttcaaaacctgggggtgatgctcaaagaggat
gaggattgtcatcgctatggcgcagacaacagcagggtggatttcccctctcacaatgcc
ggggtgatgctcaaagaggatgaggattgtcatcgctatggcgcagacaacagcagggtg
gatttcccctctcacaataccggcgtgatgctcaaggaagatgaggattgtcatcgctat
ggcaatgacaaccaaacagctgccatcagcgacaacaaggcactgctggaaggccgtcag
gcgtccatccatgcgccgctgatgacccacgagcccgacctgaatgccacccccatcaag
ggtgtagtgccggtgaaacatatcgaagcgccggtgacgaaagactattctccaaaatcg
gcaaatcgcatcccggattctgtgccttttaccccctggcacctgttcgagtttgccacc
ggcaatatcgaaaactgcttcggccccgagttcgcggtgtaccgtggccttattccgccg
cgcaccccctgcggtgacttgcagctcaccacccgggtggtggaggttaagggcaagcgc
ggcgatttcaaatcccccgcatcctgcatcggcgaatacgaagtgccgccaaaggcctgg
tattttgccgaaaacagccatccggcgcgcatgccctactccattttgatggaaatcgcc
ctgcagccaaacggctttatctcgggctacatgggcaccaccttgggcttccccgggctt
gagctctttttccgcaatctcgacggcgaaggcaccctgattaaagacattgaccttcgg
ggcaagaccatcagcaacgactcgtgcctattaagcactgtcatgtccggcaccaatatc
atccagaccttcagctttgcgctggcggcagacggtgagcccttctatgagggcaaggcg
gtgtttggttacttcaaggccgaggcgctcacccaccagttggggctggataacggcaag
gtcaccacgccctggattgaggctgagcacctgagccccgacatcagctataacctgcgc
gacagcgcctgcgccctgtatcaggccgcccccggcaagccccatctgcgcctgcccggc
ggtcgccttaactttgtcgacagggtggacattgtccgcgccggcggcaaggcaggcctt
ggctatgtgtacggcgagcgcaccattgacccaagcgactggttcttccgcttccacttc
catcaggacccggtgatgccgggctctttgggggttgaggccattatcgagctgctttca
agcttcgccctggacgcaggccttggaaatgagtttgccaatccgcgctttaatcactgc
ttaagccgtgtgaagtggaaataccgtggccaaatcagccctttaaacaggcagatgtcg
ctggagctgcacatcaccgccattgaaagggaaacaggccgcgtcaccctcaaggccgac
gcctggcttgccaaagatggcctgcgcatatacgaaatcagcgatctggccctggcgata
gaagaggcctga
DBGET
integrated database retrieval system
