Shewanella litorisediminis: JQC75_08870
Help
Entry
JQC75_08870 CDS
T07182
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
slit
Shewanella litorisediminis
Pathway
slit00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JQC75_08870 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
slit01007
]
JQC75_08870 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slit03016
]
JQC75_08870 (serS)
Enzymes [BR:
slit01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
JQC75_08870 (serS)
Amino acid related enzymes [BR:
slit01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
JQC75_08870 (serS)
Transfer RNA biogenesis [BR:
slit03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
JQC75_08870 (serS)
Prokaryotic type
JQC75_08870 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
RNase_Y_N
FlgN
Motif
Other DBs
NCBI-ProteinID:
QRH03466
LinkDB
All DBs
Position
2041152..2042438
Genome browser
AA seq
428 aa
AA seq
DB search
MLDTKYLRNELEFTKERLAARGFALDIDHLKALEEKRKSLQVATEELQASRNAISKSIGQ
AKSRGEDVAPIMAQVGNLGAELEAKKVELAALLEEINAIAMSVPNLPDESVPVGKDESEN
VEIRRWGEPRSFDFPVKDHVDLGETLGGLDFKSAVKITGSRFIVMKGQIARMHRALAQFM
LDLHTTEHGYTEAYVPLLVNTDSLLGTGQLPKFSEDLFNLKPATEEGQALSLIPTAEVPV
TNLVRDTILDEADLPIKITAHTACFRSEAGSYGKDTRGLIRQHQFDKVEMVQIVKPEQSM
DALEEMVGHAEKVLQKLGLPHRTVVLCTGDMGFGAAKTYDIEVWLPAQNTYREISSCSNV
KDFQARRMQARYRNKEDNKPALVHTLNGSGLAVGRTLVAILENYQNADGTVTVPEALRPY
MGGIEQLG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgttagataccaaatatctccgtaatgaactggaattcactaaagagcgtctggccgcc
cgcggttttgcgctggacatcgaccatctcaaagcgctggaagaaaagcgcaagtcgctg
caggtagccactgaagagctgcaggccagtcgcaacgccatctccaagtccatcggtcag
gcaaagtcccgtggtgaagacgttgcgcccatcatggctcaggtgggcaatcttggcgcc
gagctcgaagccaagaaggtagaactggcagcattgctcgaagaaatcaacgccattgcc
atgtctgttcccaatctgccggatgagtcagtacctgttggcaaggacgaaagcgaaaat
gtggaaatccgccgctggggcgagccacgcagcttcgatttcccggttaaagatcacgtt
gatcttggtgaaaccctcggtgggcttgatttcaagagtgcggttaaaatcaccggctca
cgttttatcgtgatgaagggtcaaatcgcccgcatgcaccgtgcattggcgcagtttatg
ctcgacctgcacaccacagagcacggttataccgaagcctacgtgcctttgctggtgaac
accgacagcctgctcggtaccggtcagctgcccaagttcagtgaggacttgtttaacctc
aagcccgctaccgaggaaggtcaggcattaagcttgatcccaaccgccgaagtgccggtg
accaacctggtgcgtgacaccatcctcgatgaggccgacctgcccatcaagataaccgcc
cataccgcgtgtttccgctctgaagctggttcatacggtaaagatacccgtggtcttatc
cgtcagcaccagttcgacaaggttgaaatggtacaaatcgtcaaaccagagcagtctatg
gacgcgctggaagagatggttggtcatgccgaaaaagtcctgcagaaactggggctgccg
caccgcacagtggtgctgtgtaccggcgacatgggctttggtgctgccaaaacctacgac
atcgaagtatggctgccagcacaaaacacgtaccgtgagatctcttcctgctccaacgtg
aaggacttccaggcccgccgcatgcaggcgcgctatcgcaacaaggaagacaacaagccg
gcactggttcacaccctgaacggctcaggtctggcagttggccgtactctggtggcgatt
ctggaaaactatcagaatgccgatggcactgttaccgtgcctgaagcactgcgcccatac
atgggtggtattgagcaactcggttaa
DBGET
integrated database retrieval system
