Shewanella litorisediminis: JQC75_10630
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Entry
JQC75_10630 CDS
T07182
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
slit
Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slit03400
]
JQC75_10630
DNA repair and recombination proteins [BR:
slit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
JQC75_10630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_22
AAA_16
AAA
zf-tcix
SLFN-g3_helicase
DZR
zinc_ribbon_2
zf-ribbon_3
Motif
Other DBs
NCBI-ProteinID:
QRH00363
LinkDB
All DBs
Position
2445475..2447211
Genome browser
AA seq
578 aa
AA seq
DB search
MTIKLRDYQQDAIDATLAHFRASRESALLVLPTGAGKSLVIAELARLAKGRVLVLTHVKE
LVAQNAQKVDTLAGNASIYSAGLGEKDTGGKTVIAGIQSAAVNVAAFDAPFSLVIIDECH
RVSLDENSQYRQLFSQLREKNPDLLLLGLTATPYRLGEGAIYKRHVRGHVGNPDKGVFDV
CIFELPIRSLIKQGYLTEPLLLDGLAAQYNFAALKAADDADYQEAEVQAILDTSTRATTT
IIGQIKALAQQRLGVIIFAATVRHAREIMALLDESAALITADTPGPERDNIITAFKAQEL
KFLVNVAVLTTGFDAPHVDLIAILRPTASVSLFQQMAGRGLRLYPGKAECLILDYAANGF
SLFHPDVGKPRPDSKSVPVQVPCPACGYANLFWGKADADGDIVEHYGRRCQGLLEDGNQC
DFRFRARICPDCGAENDIAARVCRGCDSALVDPDKHLKAVLAHKHHHLFKVSDMHLGATE
SGLEVTYLDMDGNQFVERFKLQTPAQKKALYAAFLLRHQRAPGLPLPKYPDAEALIKDSA
RFRAPELLLLKKSKFGWQLVDKFFDYRGKYQTRTGFAD
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgacgataaaactcagggattatcagcaagatgccatagatgcgactctggctcacttc
agagcgagtcgtgagtcagccctgttggtgctgccgacaggtgccggtaagagtctggtg
atagctgagcttgcacgcctggccaaaggacgggtattggtgctgacccacgtaaaggag
ttggtggcgcaaaatgcccaaaaggtggatacgcttgcgggcaatgccagcatctattct
gccgggctcggggaaaaagacaccggcggcaaaaccgtgattgccggcattcagtcggca
gcggtcaatgtcgcggcctttgatgcgccattttccctggtgatcatcgatgagtgtcac
agggtgagccttgacgaaaacagccagtatcggcagctattcagtcagctgcgggaaaag
aacccggatctcttgctgcttgggctcaccgccaccccctaccgtttgggggaaggcgca
atttacaaacgccatgtgcgcggtcatgtgggcaatcccgacaagggcgtgttcgatgtc
tgtatctttgagttgcccatccgcagtttgattaagcaagggtatttaaccgagccgctg
ctgctcgatggcctcgccgcccaatataacttcgccgcactcaaagccgctgacgatgcg
gattaccaggaggccgaagtgcaggccattctggataccagtacccgggccacgaccacc
atcattggtcagataaaggctctggcccagcagcgtctcggcgttattatttttgcggcc
acagtgcgtcatgccagagaaatcatggcgctgctggacgaaagtgcagcgctcattacc
gccgacaccccagggcctgagcgcgataacatcatcaccgcctttaaagcacaggaactg
aaatttctggtgaatgtggccgtgctcaccacaggctttgacgcgccccatgtggatttg
attgccatactgcggcccacggcgtcggtgagcctgttccagcaaatggcgggacgcgga
ctcaggctatacccgggcaaggccgagtgtcttattctcgactatgctgccaacggcttc
agcctgtttcacccggatgtgggcaagcccagacccgacagcaaaagtgtgcccgtgcag
gtaccctgcccggcctgcggctatgccaacctcttttggggcaaagccgatgccgatggc
gacattgtcgagcactatggccggcgctgtcagggtttgcttgaagatggcaatcagtgt
gactttcgctttcgcgcacgcatctgtcccgattgcggcgctgaaaatgatattgccgcc
agagtctgtcgtggctgcgattcggcccttgtggacccggacaaacacctcaaagccgtg
ctggcacacaagcatcaccacctgtttaaagtgagcgacatgcatcttggggccaccgag
tcgggcctcgaggtgacctatctggatatggatggcaaccagtttgtcgagcgttttaaa
ttgcaaacgccggcgcagaagaaagccctgtacgccgcatttttactgcgtcaccaacgg
gcgccggggttacccctgcccaaatatccagacgctgaagccctgataaaagacagtgcc
agattcagggcaccggagctgcttttgctgaaaaagagcaagtttggctggcagctggta
gacaagttttttgattaccgtggcaagtatcaaacccgcacaggttttgcagactaa
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