Spodoptera litura (tobacco cutworm): 111347747
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Entry
111347747 CDS
T08157
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03022
Basal transcription factors
sliu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111347747
09124 Replication and repair
03420 Nucleotide excision repair
111347747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sliu03021
]
111347747
03400 DNA repair and recombination proteins [BR:
sliu03400
]
111347747
Transcription machinery [BR:
sliu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111347747
DNA repair and recombination proteins [BR:
sliu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111347747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Motif
Other DBs
NCBI-GeneID:
111347747
NCBI-ProteinID:
XP_022813830
UniProt:
A0A9J7IJY8
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All DBs
Position
6:7406282..7410435
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AA seq
404 aa
AA seq
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MADDEQDTKEYRWETGYEKTWEAIKEDEDGLVEGLVAEFAQKAARKAVVPRRGPVRLGMM
RHVLLAVDCSEAMNSQDLKPSRFLCTLKLLEKFIEEYFDQNPLSQLGLVLMKNKRAEKLT
ELSGNVRKHLKALQGLTEMSLNGEPSLQNTLEFAGRVLKPLPAHASRELLVLFASLTTCD
PGDINITIQALKTEGIRCSVIGLAAEVRICKKLCQDTGGEYGVVLDDVHYRSLLLDSTSP
PPRARALDAGLVKMGFPHSAPQTNQTDPGTNADPPITVCMCHLDDGEGVGGEGHLCPQCR
SKYCSLPAQCRTCGLTLASAPHLARSYHHLFPVEPYEEVAYEGQAQYCFACLRNFTDLDK
QVYRCGRCHEFYCWECESVVSTTIHVCPGCASRPHLYQRLPDTS
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgacgagcaagataccaaagagtaccggtgggagacaggttatgagaagact
tgggaggctattaaagaagatgaggatggtttggtggaaggattggtggcggagtttgca
cagaaagcagctcgtaaggctgttgtacctcgtcgtggtcccgtcaggctgggaatgatg
agacatgttctattggctgtggattgttcagaagccatgaactcacaggatctaaaacca
tctagatttctttgcacattgaaattgctagaaaagttcatagaggagtactttgaccag
aatccattaagtcaacttggtttagttttaatgaaaaataaaagggctgagaaacttaca
gagctgtctggtaatgttagaaaacatttgaaagctttacaagggttaacagaaatgtct
cttaatggtgagccatcactacagaatactttggagttcgctggtcgagtcctgaaaccc
ttacctgcacatgcatcaagagaattactggtgctgtttgcatcactcaccacttgtgat
ccaggagatataaatatcactatacaggctctgaaaactgaaggaataagatgttcagtg
attggtttagcagcagaagtgaggatatgtaagaagttgtgtcaagatactggcggagaa
tatggggtggtgttagatgatgtacactatcgttccctgttactggactccacgagtcca
ccaccccgagcgcgggcgttggatgcgggtctagttaagatgggcttcccacattctgct
ccacaaaccaaccaaactgaccccgggacgaatgctgatccacctattactgtttgtatg
tgtcatctagacgacggtgaaggagtaggcggtgaagggcacctatgtccgcaatgtcgc
agcaagtattgttcgctgccagcccagtgccggacctgtggacttaccttagcgtcggcg
cctcatctagccagatcatatcaccatttattccctgtggagccgtacgaagaagtagca
tatgagggacaagcgcaatactgctttgcctgccttaggaactttacagatctcgataaa
caggtgtacagatgtgggcggtgtcacgagttctactgctgggagtgtgagagtgtggtc
tccacgacgatacacgtatgtcctggctgcgcgtcacgaccccatctctaccaacgactg
cctgacacttcatga
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