Spodoptera litura (tobacco cutworm): 111348444
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Entry
111348444 CDS
T08157
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03022
Basal transcription factors
sliu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111348444
09124 Replication and repair
03420 Nucleotide excision repair
111348444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sliu03021
]
111348444
03400 DNA repair and recombination proteins [BR:
sliu03400
]
111348444
Transcription machinery [BR:
sliu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111348444
DNA repair and recombination proteins [BR:
sliu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111348444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
111348444
NCBI-ProteinID:
XP_022814827
UniProt:
A0A9J7DPR8
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Position
1:complement(35704..41905)
Genome browser
AA seq
477 aa
AA seq
DB search
MSESSKSKSLNLNPSPTLQCKDLHEYLKSRSAQFLETLYNYPTICLAVYRELPELARHFV
IRLLFVEQPVPQAVVTSWVSQTFAKEQAKACEALSELSVWQEAPIPGGMPGWMLAQSFKK
NLKVALLGGGRAWSMSSSLEPDGKARDVAFLDAYALERWECVLHYMVGSAQTEGISADAV
RILLHAGLMTRDAEDGSAVITRAGFQFLLLSTAKQVWLFLQHYLHTAEKRSLSAAECLAF
LYQLSFSTLGKDYSTEGMSNNMLVFLQHLREFGLVYQRKRKAGRFYPTRLALNIAQVRGG
GAAPLAAPAQARGYIVVETNYRVYAYTQTNLQVALLGLFTELMYRFPNLVVGVLTRESVR
QALRGGITAEQIIHYLEQHSHPQMLKSETGGIRTSSMLPPTVVDQIKLWETERNRFTYTE
GVVYNQFLSQADFVVLRDYAKQQGVLTWQNERSRTMVVTRHGHDDVKKFWKRYSKSS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatcctcgaaatcaaaatctttaaatttaaatccgtcgcccactttacaatgc
aaagatctccacgaatatctgaaaagtcggtctgctcagtttttagagactttatataat
tatcctacgatatgtcttgcagtttaccgagagttaccggagctagcgcggcactttgta
atcaggctgctgtttgtagagcaaccggtaccacaggcggtcgtcacgtcgtgggtgtca
cagacattcgccaaagagcaagccaaagcttgtgaggcgttatcagagctgtcagtatgg
caggaggctcctatacccggaggcatgcctggctggatgctggcacagtccttcaagaaa
aacctcaaagtagctttgcttggaggtggtcgtgcttggagcatgtcttcttccttggag
ccggatggtaaggcccgtgacgtggctttcttggatgcgtatgcactggagcgctgggag
tgtgtattgcactacatggtggggagcgctcagaccgaggggatcagtgctgatgctgtt
aggatactgctgcatgctggactcatgaccagagatgcggaggacgggtcggctgttatt
actcgcgctgggttccagtttctactattaagtactgctaaacaagtgtggctgttccta
caacattacttgcacacggcggagaaacggagcctgagtgcagcggagtgcctcgccttc
ttataccaacttagttttagcacacttggcaaggactacagcacagaaggaatgagtaac
aacatgctggtattcttgcagcatttgagagagtttggacttgtttatcaaagaaagcgc
aaagcaggtcgtttctacccgactcgtctcgctctgaacatagcgcaggtccgcggaggg
ggggcggcgccgctggctgcgccggcgcaggcgcgcgggtacatcgtggtggagaccaac
tacagagtctacgcctacacacagaccaacctacaggtggcactgctcggcctgttcacg
gagctcatgtacaggttccctaacttagtagtaggagtactgactcgcgagtcagtccgg
caggcgctgcgcggcggtatcactgccgagcagatcatccactacctcgagcaacactca
catccacagatgttgaagtcggagacaggcggtatcaggacgagctcgatgctccccccc
acggtggtggaccagatcaagctgtgggagactgagaggaacaggttcacgtacaccgag
ggagtcgtctacaatcagttcctgtcacaggcagatttcgtggtactccgcgactacgcg
aagcagcaaggagtgttgacctggcagaacgaacgctcgcgaacgatggtcgtcacacga
cacggacacgatgatgtcaagaagttctggaagcgatactctaagagctcttag
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integrated database retrieval system
