Spodoptera litura (tobacco cutworm): 111353136
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Entry
111353136 CDS
T08157
Name
(RefSeq) DNA ligase 4-like isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
111353136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sliu03400
]
111353136
Enzymes [BR:
sliu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
111353136
DNA repair and recombination proteins [BR:
sliu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
111353136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_A_C
RNA_ligase
DNA_ligase_IV
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
111353136
NCBI-ProteinID:
XP_022821791
UniProt:
A0A9J7E0I7
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Position
16:11867437..11881275
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AA seq
893 aa
AA seq
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MANEVIPANEIKFEKFCSILEQLHKRKRQRQEQDKILGNFLNECKLSASQVVGKKNATLF
PILRLLLPKLDSERSAYNLKESKLGVLLVKVLSLCKQSRDAQKLLNYRSVNNSQDSDFPG
VAYFVFKSRMKPKSEDITVGDINGILDNIAAAEVGMKASVLDETFSQVINKVTADQMKWF
LRLILKELKLEMGSNRILALFHPDAPEYYETCGLLSKVCEELGEGDSRPLELGIEMFHAI
SPMLSERLDVKNIAKQLSSNKTYQIENKFDGERFQIHMLNGKFEYFSRRGFSFTKNYGGS
YESGLLTPHLKDTFSSDVTSFILDGEMMGWHKQYQCFGCKGMAFDVKKITESSRFQSCFC
AFDILYYNGRTLVGPPEKGGLPLRERLLILDKVFTDKTGVIKHSDRKTLSKETIFPEILD
ALNKAIENQDEGIVVKDVDSYYIPNRRNAGWYKIKPEYTEGAMSDLDLVIIGADEAENKR
QGRAKSFHVACSDGASPGKMPERWISIGRVSTGFTFDERETLCATLERNWTSSRQTPAPS
NLSFSKNKPDFWILPEHSVVLTVRASELVRASGFGTDYTLRFPRVTKIRDDKPVQDVMTL
MEFQNLCANKGPVVKLSTNQINGDEIAEVKPRAKRKIEAPKVPEQFQIRSRGDVEATSKA
LLGRKLCILSEDVDCTRQELCKIIETHGGKVVANVGPDTWCGVAGQQTSRVRSVIESQRL
DVLSTAWLRSLPSAEAPVQPPPVDMLAIKPATRLTLARHYDAYGDSYTEPTDEVTLRKVF
DKMDGDVQIYLTHQEMLNLDKEIFGDNNPHSFLRPCSIHVTELEGLNAILASMYGANVLD
TPSTDCTHIVVPSNIEKTELDSLKTYSAMVVSENWLEACFSEKKLVSEAEFLV
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgaagtgattcctgcaaatgaaattaaatttgaaaagttttgtagcatctta
gaacagctgcataagaggaaaaggcaaagacaagaacaagataaaatattgggaaacttt
ctaaatgaatgtaaactaagtgcgtcacaagtggtagggaaaaagaatgctactttattc
ccaattctaagactgctgctgccaaaactagatagtgaaaggagtgcttataatttaaaa
gaaagcaaacttggcgtgttacttgtaaaagttctatcactttgcaaacaatctcgcgac
gcgcagaagttactgaattacagatcagtaaataactctcaggacagcgattttcctgga
gttgcatactttgtttttaaaagtagaatgaaaccaaaatctgaggacatcactgttggt
gatattaatggcatccttgataacatcgccgcagctgaagttgggatgaaggcgtcggtt
ctcgatgaaacgttcagccaagttataaataaagtgactgcagaccagatgaagtggttc
ctcagactgatactcaaagagctcaaattggaaatggggagtaatcgcatattggctcta
tttcaccctgacgctcccgaatattatgaaacctgtggcctattgtccaaggtgtgtgaa
gagctcggtgagggagattctcgtcctttggagctgggaatagagatgtttcatgcaatt
agcccgatgctgtccgaacgactcgacgtcaagaatatcgccaagcaactgtcctcgaac
aaaacttatcagattgagaacaagtttgacggtgaaagatttcaaatacacatgctaaac
ggaaaatttgaatatttttcgcgaagaggtttttcattcaccaagaactatggaggcagt
tatgaatctggcctgttgacgcctcatttaaaggacaccttctcatctgatgttaccagc
tttattctagacggcgaaatgatgggttggcataaacaataccagtgctttgggtgtaaa
ggcatggctttcgacgttaagaaaataacagagagttcgaggttccaatcttgtttctgc
gctttcgatattctgtactacaatggtagaacattagttgggcctccagagaaaggaggg
ttgccacttagagaacgacttcttattttggacaaagtgtttactgacaaaactggagtc
ataaaacatagtgatcggaagacattgtctaaggagaccattttccctgagattttggat
gctctgaacaaggcgatagagaatcaagatgagggcatagtggtaaaagatgtggattcg
tactacattcccaatcgacgcaatgctggatggtacaaaattaaacctgagtatacagaa
ggtgccatgagtgacctagaccttgtgattatcggggctgatgaggctgagaacaagagg
caaggtcgcgccaagagtttccacgtcgcctgtagcgatggagctagccctggtaaaatg
cctgagcgctggatatcaataggtcgggtatctactggctttacgtttgacgagcgagag
accctatgtgccacattggaacgcaactggacgtcctctagacagacaccagcgccatct
aacttgagtttcagtaaaaataaacctgacttctggatcctacctgaacattccgtcgta
ttaacggttcgagcgtcggagttggtccgtgcatcaggctttggtacggactacacgcta
aggtttccacgcgtcacgaaaataagagacgataaacccgtacaagatgtcatgacacta
atggagttccaaaatctttgtgctaacaaaggaccggtagtaaaattgagtaccaatcaa
ataaatggggatgaaatagccgaagtgaaacctcgagcgaagcgaaagatagaggcgccg
aaggtcccagagcagttccagatcagatctcgtggtgatgtcgaagccacttcgaaggct
cttctcggaaggaagctgtgcatactgtccgaagatgtcgactgtactcgacaggaactc
tgcaagatcattgaaacacacggcgggaaagttgtcgctaatgtcggtccggacacatgg
tgcggggtagcgggtcagcaaaccagtcgtgtacgtagtgtaattgaatcacaacgcctg
gatgtactgagcaccgcctggttacgttccctgccctcggctgaagcacccgtgcagcct
ccaccggtagatatgctggccatcaaacctgccacgagactaaccctcgccagacattat
gatgcttacggagacagctacacagaaccaactgacgaggtaactctgaggaaggtgttc
gataaaatggatggtgatgtacaaatctacctcacacatcaagagatgctgaacttagac
aaggagatatttggggacaacaatccgcactcattcttgcgtccttgctccatacatgtg
acggagctggaaggacttaacgctattctagcttcgatgtacggagccaatgttcttgat
actccgtccacagactgcacacatattgtagttccaagcaatattgaaaagactgaacta
gatagtcttaaaacgtatagcgcaatggttgtaagtgaaaactggcttgaagcttgcttt
tccgaaaaaaaattagtgtctgaagccgaatttcttgtgtga
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