Spodoptera litura (tobacco cutworm): 111358899
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Entry
111358899 CDS
T08157
Name
(RefSeq) histone deacetylase Rpd3
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03082
ATP-dependent chromatin remodeling
sliu03083
Polycomb repressive complex
sliu04213
Longevity regulating pathway - multiple species
sliu04330
Notch signaling pathway
sliu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111358899
03083 Polycomb repressive complex
111358899
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111358899
04350 TGF-beta signaling pathway
111358899
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
111358899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sliu03036
]
111358899
Enzymes [BR:
sliu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
111358899
Chromosome and associated proteins [BR:
sliu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
111358899
HDAC complexes
Sin3A-HDAC complex
111358899
BRAF-HDAC complex
111358899
REST complex
111358899
SHIP complex
111358899
MiDAC complex
111358899
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
111358899
Heterochromatin formation proteins
Other heterochromatin formation proteins
111358899
Chromatin remodeling factors
NuRD complex
111358899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
111358899
NCBI-ProteinID:
XP_022830052
UniProt:
A0A9J7EKC1
LinkDB
All DBs
Position
28:complement(8086886..8092343)
Genome browser
AA seq
485 aa
AA seq
DB search
MAMQPHSKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
ADEMTKFHSDDYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAA
AVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESI
FVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGRCVELVKRFGLPFLLVGG
GGYTIRNVSRCWTYETSVALGVEIANELPYNDYFEYFGPDFKLHISPSNMSNQNTPEYLE
KIKNRLFENLRMLPHAPGVQVQAIPEDAVNDESEDEDKVDKDERLPQSEKDKRITGDGEL
SDSEDEGEGGRRDNRSYRTPQPRKRPRLDKDGSTIKDEIKTEDSKDDVKNISSVEEPKKE
LPPNP
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcaaccacatagcaagaaaagggtgtgctattactacgacagtgacattgga
aactattattatggacagggtcatcccatgaaacctcaccgtatacgcatgacacacaat
ttacttcttaactatggattatatagaaaaatggaaatttatagaccacacaaagctact
gctgacgagatgacaaaattccactctgatgactatattcgcttcttgcgatcaatacga
cctgacaacatgtccgagtacaacaaacagatgcagagattcaatgtgggtgaggactgt
ccagtgtttgatggtctttatgagttctgccagttgtcagccggtggctctgtggctgcc
gctgtcaagctaaacaaacaggcctccgagatctgcatcaattggggtggaggtctccat
catgctaagaaatcagaagcctctggtttctgttatgtcaatgatattgtgttgggtatc
ttggaattgctcaaataccaccagagagtactttacattgatattgatgtccaccatgga
gatggcgtggaggaagctttctacacgacagacagagtcatgactgtatcattccacaaa
tatggagaatacttccctggcactggtgacctccgggatattggtgctggaaagggcaaa
tactatgcagttaacatccccctgcgtgatggtatggatgatgagtcttatgaatccatc
ttcgtacccatcatctcaaaggtcatggagacgttccaaccaagtgcagtggtattgcag
tgtggtgcagactccttaacaggtgacaggcttggttgtttcaatttgaccgtacgtggc
catggtcgctgcgtagaactcgtaaagagatttggtctgccattcttacttgttggagga
ggaggatacacaattcgtaatgtgtctcgttgctggacttacgagacctcagtagctctt
ggtgtagaaatagccaatgagcttccctacaatgactactttgaatacttcggccccgac
ttcaaacttcacatatcacctagtaacatgtccaatcagaacacacctgagtatttggaa
aaaattaaaaataggctgtttgagaatctgcgaatgttaccgcatgctcctggtgttcag
gtgcaagccatcccagaagacgcagttaatgatgaatccgaggatgaagataaagttgac
aaagatgagagattgccacaaagcgaaaaggataagcgcatcactggtgatggggaattg
tctgactcggaagatgaaggagaaggcggtcgtcgcgataacaggtcgtacaggacacca
caaccgcgcaagcgcccacgtttggacaaagacggatcgacaatcaaagatgaaatcaaa
actgaagactcaaaggacgacgttaagaacatcagcagtgttgaagagccaaagaaagaa
ttgccgcctaatccctga
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