Spodoptera litura (tobacco cutworm): 111359050
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Entry
111359050 CDS
T08157
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03013
Nucleocytoplasmic transport
sliu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111359050
09122 Translation
03013 Nucleocytoplasmic transport
111359050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sliu03019
]
111359050
03041 Spliceosome [BR:
sliu03041
]
111359050
Messenger RNA biogenesis [BR:
sliu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
111359050
Spliceosome [BR:
sliu03041
]
Complex C
Other components
EJC/TREX
111359050
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
111359050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
Adeno_E3
Motif
Other DBs
NCBI-GeneID:
111359050
NCBI-ProteinID:
XP_022830247
UniProt:
A0A9J7EKQ4
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All DBs
Position
28:complement(9333202..9340224)
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AA seq
679 aa
AA seq
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MSDKLGFDELRNKYKDVLSKAFTTNNIDLLDSFTKNTNETDRKAAMDHAFRDKLLELLIE
EPDTLENFVSFCIESCRRQMVTPTMPVVLLGDIFDALTLNKCEKLFSYVENGVNIWKEEL
FFVACKNNLLRMCNDLLRRLSRSQNTVFCGRILLFLAKFFPFSERSGLNIVSEFNLENVT
EFGGDSSSTLKDSLDEEMVVDNNEKNKINIDYNLYCRFWSLQDFFRNPNNCYNKLQWKTF
VAHSGSVLSAFSSYKLETVELQKSKLNLLKPVKTMATDIEMKDSETNEPHYFAKFLTNQK
LLELQLSDSNFRRCVLVQFLILFQYLTSTVKFKMEVQELKSDQVDWVKETTSLVYKLLGE
TPPNGKQFAECVKHILKREEHWNSWKNDGCPEFQKPKPPVSVESTDDVKKSRKRRRPVGD
IIKEYEAQSKSYMGNNELTKLWNLCPDNLAACRTKERDFMPSLESYMVSPRSSTLARSCE
GGWGWRALRLLARRSPHFFVHTNNPIGRLPDYLTAMVERVTREVAANAAANANGESSKNH
NDKPVKTENNEEEITEEQMEADLIKEGDANDIEQVPDSTHAGEEDYDKTARSRVTMISPA
QLEALSSKLTDWKKLAAKLGYKADEIQFFETENATDSARAKNMLQLWFDDDEDASVENLL
YIMEGLKMTDACEALKNVK
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataaattaggatttgacgaactgcgaaataaatacaaggatgtgctgtccaaa
gccttcacaactaacaatatcgacttgctggattcatttacaaagaatacaaatgagacc
gacagaaaagcggcgatggatcatgcgttccgagataaactgctggaactcctaattgag
gagccagatacgcttgaaaatttcgtttctttctgcatagagtcatgtagaagacagatg
gtaacacctacgatgccagtggtgcttcttggagacatttttgacgcgctaacattgaat
aagtgcgaaaaactgttctcctacgttgaaaacggcgtaaacatatggaaagaagaatta
tttttcgtagcttgtaagaataacttgctaaggatgtgtaatgatctcctaagaagacta
tcaaggtcacaaaacacagttttctgtggtcggatccttttgtttcttgcgaagttcttt
cctttttctgaaagatcaggattgaacatagtctctgaatttaatttagagaatgtcaca
gaatttggaggagacagttccagtacattaaaagattccttagatgaagaaatggtggtt
gacaataatgaaaagaataaaataaatatagattataacttgtactgtagattttggagt
ttacaagatttctttaggaacccgaataactgttataataagttgcagtggaagacattt
gttgctcattcaggcagtgtgctttcagcgttttcctcatataaactcgaaacagtagaa
ttacagaaatcaaagctcaacctactaaagccagtaaaaaccatggcaaccgacattgag
atgaaggactctgaaaccaatgaacctcattacttcgccaagtttttgaccaatcagaag
ctcttggagttacaactatccgattctaatttccgaagatgtgtccttgttcagttccta
atcctattccagtatctcacatctactgtgaagtttaaaatggaagtacaagaactgaag
tctgatcaagtggactgggtcaaagagactacatcactcgtgtacaagttactgggcgag
actcctcccaatggaaagcagtttgctgagtgcgtcaagcatatattgaagagggaggaa
cattggaacagttggaaaaatgatgggtgtcctgaattccagaaaccaaagccccctgta
tcagtggaatcgacggatgatgtgaagaagtcgagaaaacgtcgccgtcctgtcggtgac
atcatcaaggagtatgaagctcaaagtaaatcttatatgggaaataatgaattgacaaag
ttatggaacttgtgtcctgacaatcttgccgcctgccgcactaaagagagagacttcatg
ccgtcgttagagtcgtacatggtgtccccgcggtcgtcgaccctggcgcggtcgtgcgag
ggggggtgggggtggcgcgcgctccgcctgctggcgcggcgctcgcctcacttcttcgta
cataccaacaatcctattggacgactgcccgactacttgactgctatggttgagcgagtg
acccgcgaagtagcggccaacgcagctgctaatgcgaatggagagtcctctaagaaccat
aatgataaacctgttaaaacggagaacaatgaagaggagattaccgaggaacaaatggaa
gcagatctcataaaggaaggagacgccaatgatatcgaacaggtaccagactcgacgcac
gccggcgaagaagactacgacaagacagcccgttctagagtgacaatgatatcaccagct
caactcgaggccctatcctctaagctcacagactggaagaaattagccgccaaactgggc
tacaaagctgatgaaatccagttctttgagacagaaaacgcaacagattccgcaagagcg
aagaacatgctccaattatggttcgatgatgatgaggacgcgtccgttgagaacctcctg
tacattatggaaggtttgaagatgacagatgcctgtgaagcactgaaaaacgtcaaatga
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