Shewanella livingstonensis: EGC82_16265
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Entry
EGC82_16265 CDS
T05875
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
slj
Shewanella livingstonensis
Pathway
slj00521
Streptomycin biosynthesis
slj00523
Polyketide sugar unit biosynthesis
slj00541
O-Antigen nucleotide sugar biosynthesis
slj01100
Metabolic pathways
slj01110
Biosynthesis of secondary metabolites
slj01250
Biosynthesis of nucleotide sugars
Module
slj_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
slj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
EGC82_16265 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EGC82_16265 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EGC82_16265 (rfbC)
Enzymes [BR:
slj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
EGC82_16265 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AZG74167
UniProt:
A0A3G8LXN5
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All DBs
Position
complement(3763820..3764368)
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AA seq
182 aa
AA seq
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MNVIATQIPDVKIIEPTVFGDDRGFFMQTWSQQQFEALVTGKPTIFVQDNHSKSNKGTLR
GLHYQTQHTQGKLVRVVSGEVFDVSVDIRKGSPTFGQWVGVYLSAANKRQLWIPEGFAHG
FYVTSDQAEFIYKCTDYYCPGSEESIAWNDPAIGIQWPLTNPPLLSNRDAHLSVLLKHAQ
CL
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcatcgctacacaaattccagatgtgaagattatagagcccaccgtgtttggc
gatgatcgtggcttttttatgcagacgtggagccagcaacagtttgaagcactcgtgaca
ggcaagcctaccatttttgtacaggataaccattccaagtcgaacaagggaacattacgc
ggtttacattatcaaacacaacacactcaaggaaagctggtacgtgtcgtgagcggtgaa
gtatttgatgtgagcgtcgatattcgtaaaggctcacctacctttggtcaatgggtcggc
gtttacttatctgccgccaataaacgccagttgtggatcccagaaggctttgcccatggt
ttttatgtaacaagcgaccaggctgaatttatttacaaatgtactgattattattgccct
ggatctgaagagagtattgcctggaatgaccccgctattggcattcaatggccgttaact
aacccacctttattatcaaatagagatgctcacctaagtgtattgctcaagcacgcacaa
tgtttatag
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