Stenotrophomonas sp. LM091: BIZ42_02645
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Entry
BIZ42_02645 CDS
T04630
Name
(GenBank) multidrug efflux RND transporter permease
KO
K18138
multidrug efflux pump
Organism
slm
Stenotrophomonas sp. LM091
Pathway
slm01501
beta-Lactam resistance
slm01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
slm00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BIZ42_02645
01503 Cationic antimicrobial peptide (CAMP) resistance
BIZ42_02645
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slm02000
]
BIZ42_02645
01504 Antimicrobial resistance genes [BR:
slm01504
]
BIZ42_02645
Transporters [BR:
slm02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
BIZ42_02645
Antimicrobial resistance genes [BR:
slm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
BIZ42_02645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
AOX61187
LinkDB
All DBs
Position
588700..591873
Genome browser
AA seq
1057 aa
AA seq
DB search
MPKFFIEHPVFAWVVAILISLAGVISILGLGVESYPSIAPPQVTVSATYPGASADTAEKS
VTQVIEQQLTGIDHLLYFSSSSASNGRVTITLTFETGTDADIAQVQVQNKVSLATPRLPT
EVTQQGVVVAKANAGFLMVVALQSDSASIDRDALNDIVGSRVLDQISRIPGVGSTQQFGS
EYAMNIWLNPEKMQGYGLSATQVLAAIKDQNVQFAAGSLGSDPSPEGHYFTATVSAEGRF
SSPEEFENIILRANTDGSRVLLKDIARIAFGANNYGFDTQYNGKPTGAFAIQLLPGANAL
NVANAVTAKMDELAPSFPAGVSWFSPYDSTTFVKISIEEVVKTLIEAVALVFLVMLIFLQ
NFRATLIPTLVIPVALLGTFLGMSIIGFTINQLTLFAMVLAIGIVVDDAIVVIENVERIM
TEEKLPPKAATQKAMTQITGAVVAITVVLAAVFIPSALQGGAAGEIYKQFALTIAIAMAF
SAFLALGFTPALCATFLKPTHNDNPNIVYRTFNKYYDKVSNTYVGHITSAVKHAPRWMIL
FVVLTVLCGFLFTRMPGSFLPEEDQGYALAIVQLPPGSTKSQTNHAFAQMRGILEKQDGF
EGMLQVAGFSFVGSGENVGMGFIRLKPWADRDITVPEFINNMNGAFFGIKEAQIFVVNLP
TVQGLGQFGGFDMWLQDRGGVGYEQLTQARNILLGKAAQESDLLTGVRPNGLENAPQLQL
HVDRVQAQTMGLSVSDVYSTIQLMLAPVYVNDFFYEGRIKRVTLQADGPYRTGAESLNSF
YTPSTLQTNADGTQAMIPLSTVVKSEWVSAPPSLSRYNGYSAVNIVGSQAEGRSSGEAMQ
AMERIVNDDLPAGFGYDWSGMSYQEILAGNAATLLLVLSIVVVFLCLAALYESWSIPVAV
LLVVPLGVLGALAFSLARGLPNDLYFKIGLITVIGLAAKNAILIVEFAVEQRAAGKNLRE
ATIEASRLRFRPILMTSFAFIMGVVPMAISTGAGANARHAIGTGVIGGMVFATFLGLLMI
PVFFVVVRRMLGDKLDEPSKEFLERQGEANTAHRPDR
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaatttttcattgaacacccggtattcgcctgggtggtcgcgatcctgatctcg
cttgcgggcgtgatctcgatcctgggtctgggcgtggagtcctacccgagcatcgcaccg
ccccaggtgacggtgagcgccacctaccccggcgccagcgccgacaccgccgaaaaatcg
gtcacccaggtgatcgagcagcagctgaccggcatcgatcacctgctgtacttcagctcc
tcctcggcctccaacggccgcgtcaccatcaccttgaccttcgagaccggcaccgatgcc
gatatcgcccaggtccaggtgcagaacaaggtctcgctggcgacccctcgcctgccgacc
gaggtgacccagcagggcgtggtggtggccaaggccaacgccggcttcctgatggtggtg
gccctgcagtccgacagcgcctcgatcgaccgcgatgccttgaacgacatcgtcggctcg
cgcgtgctcgaccagatctcgcgtattcccggcgtgggcagcacccagcagttcggttcc
gagtacgccatgaacatctggctcaacccggaaaagatgcagggttacggcctgtcggcc
acccaggtgctggccgcgatcaaggaccagaacgtgcagttcgcagccggctcgctgggc
tcggatccctcgcctgaaggccactacttcaccgcgacggtctcggccgaaggccgcttc
agctcgccggaagagttcgagaacatcatcctgcgcgccaacaccgatggctcgcgcgtg
ctgctcaaggacatcgcccggatcgccttcggtgcgaacaactacggctttgatacccag
tacaacggcaagccgaccggtgccttcgcgatccagctgctgccgggcgccaacgcactg
aacgtggccaacgcggtcaccgccaagatggacgaactggccccgagcttcccggccggt
gtgagctggttctcgccgtacgacagcaccaccttcgtgaagatctcgatcgaggaagtg
gtcaagaccctgatcgaagcggtcgcgctggtcttcctggtgatgctgatcttcctgcag
aacttccgcgccacgctgatcccgaccctggtcatcccggtcgcgctgctgggcacgttc
ctgggcatgagcatcatcggcttcaccatcaaccagctgacgctgtttgcgatggtgctg
gcgatcggcatcgtggtcgatgacgcgatcgtggtgatcgagaacgtcgaacgcatcatg
accgaggagaagctgccgcccaaggccgccacccagaaggccatgacccagatcaccggt
gcggtggtcgccattaccgtggtgctggcggcggtgttcattccgtcagccctgcagggc
ggcgccgccggtgagatctacaagcagttcgcgctgacgatcgccatcgcgatggccttc
tcggcgttcctggcgctgggcttcaccccggcgctgtgcgcgacgttcctcaagccgacg
cacaacgacaacccgaacatcgtctaccgcaccttcaacaagtactacgacaaggtcagc
aacacctacgtgggccacatcacctcggcggtgaagcatgccccgcgctggatgattctg
ttcgtggtgttgaccgtgctgtgcggcttcctgttcacgcgcatgccgggcagcttcctg
cccgaagaagaccagggctatgcgctggcgatcgtgcagctgccgccgggctcgaccaag
tcgcagaccaaccacgccttcgcccagatgcgcggcatcctggaaaagcaggatggcttc
gaaggcatgctgcaggtggccggtttcagcttcgtcggttccggtgaaaacgtgggcatg
ggcttcatccgcctcaagccctgggcggaccgcgacatcaccgtgcccgagttcatcaac
aacatgaacggcgcgttcttcggcatcaaggaagcgcagatcttcgtggtcaacctgccg
accgtgcagggcctgggccagttcggcggcttcgacatgtggctgcaggaccgtggcggc
gtgggttatgagcagttgacgcaggcccgcaacatcctgctcggcaaggcggcgcaggaa
agcgacctgctgaccggcgtgcgcccgaacggcctggaaaacgccccgcagctgcagttg
cacgtggaccgcgtgcaggcgcagaccatggggctgtcggtgtcggacgtgtacagcacc
atccagctgatgctcgccccggtgtacgtcaacgacttcttctatgaaggccgcatcaag
cgcgtgaccctgcaggccgatggtccgtaccgcaccggtgcggagtcgttgaacagcttc
tacacgcccagcacgctgcagaccaacgccgacggtacgcaagcgatgattccgctgagc
accgtggtgaagtccgagtgggtgtccgccccgccgtcgctgagccgctacaacggttac
tcggcggtcaacatcgtcggttcgcaggcggaaggccgcagctcgggcgaggcgatgcag
gcgatggaacggatcgtcaacgacgacctgccggccggcttcggttacgactggtcgggc
atgtcctaccaggaaatcctggccggcaacgccgcgacgctgctgctggtgctgtccatc
gtggtggtgttcctctgcctggccgcgctgtatgaaagctggtcgatcccggtggcggtg
ctgctggtggtgccgctgggtgtcctgggcgcgctggccttctcgctcgcgcgtggcctg
ccgaatgatctgtacttcaagatcggcctgatcaccgtgatcggcctggccgcgaagaac
gcgatcctgatcgtggagttcgcggtggaacagcgggccgcaggcaagaacctgcgcgag
gcgaccatcgaagcctcccgcctgcgtttccgcccgatcctgatgacctccttcgccttc
atcatgggcgtggtgccgatggccatctccaccggtgccggcgccaacgcacgtcacgcg
atcggtaccggcgtgatcggcggcatggtgttcgccaccttcctgggtctgctgatgatc
ccggtgttcttcgtggtggtccgccgcatgctgggcgacaagctggacgaaccgtccaag
gagttcctggaacgccagggcgaagccaatacggcgcaccgtccggatcgttaa
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