KEGG   Stenotrophomonas sp. LM091: BIZ42_04405
Entry
BIZ42_04405       CDS       T04630                                 
Name
(GenBank) DNA ligase-associated DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
slm  Stenotrophomonas sp. LM091
Brite
KEGG Orthology (KO) [BR:slm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:slm03400]
    BIZ42_04405
Enzymes [BR:slm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BIZ42_04405
    5.6.2.6  RNA 3'-5' helicase
     BIZ42_04405
DNA repair and recombination proteins [BR:slm03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BIZ42_04405
SSDB
Motif
Pfam: Lhr_WH DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: AOX61495
UniProt: A0A1D8Y7F0
LinkDB
Position
983519..985966
AA seq 815 aa
MARLTAWFASRGWAPLPFQKAMWKHYLAGDSGLLHTPTGSGKTLAMFGGPLLQALHDPPP
RTTRGRAKTPVPVLQVLWITPLRALAADTARALREPLDALGLDWQVGLRTGDASARDKRL
AREGRLDVLVTTPESLALLLSYPDTMARLQHLRCVVVDEWHELLGNKRGVLLQLNLRRLR
DALPALQVWGLSATLGNLEEAREVLLPDVPDAPLVAGARPRPVSVETLLPAQGERFPWAG
HLGLSQLQRVLEKLLTVRTSLLFTNTRAHAELWHQALAAVWPEDPDTLALHHGSLDPALR
RAAEQGLREGRLRCVVATSSLDLGVDFPSVDQVLQIGSPKGIARLLQRAGRARHRPGESG
HIVCVPSHALELVEYAAARRALAQGHIEARRPLRLSLDVLAQHAVSCALGGGFAPDALLE
QVRRTHAFAGLDSTHWEAVLEFIVQGGRALSQYPDFHKVVRDDDGIYRVHDRRVALRHRL
SIGTITSDGSVMVQFLRGGRLGAVEEQFLSRLRPGDRFQFAGRLLELVRLENLTAYVRLA
RGGDGVVPRWQGGRLPLSDALGHEMETVLARPADSPEMRWLAPLLALQTRLSALPGPELL
LVEHVRRRDGQFVFVYPFAGRQVNEGLAALMALRWTRQHSNTFGYAANDYGFVLAPARPV
ELDAARVRTLLAPEGLLTDLRESLNLGELARRQFRDIARVSGMLVPALPGRTPRSLRQLQ
ASSGLLYDVLRQHDPDHILLTLAEHEVLHDQLDLASLARALSRCQARTLSVQHPTSLGPL
SFPLWAERLRGQLSNEDWKTRVLRAAQQLEKRHGA
NT seq 2448 nt   +upstreamnt  +downstreamnt
atggcccgcctgacagcgtggttcgccagccggggctgggcgccgctgccgttccagaaa
gcgatgtggaagcattacctggcgggcgactcgggcctgctgcacacacccaccggtagc
ggcaagacgctggcgatgttcggcgggccgctgctgcaggcgctgcacgatccgccacca
cgcaccacgcgtggccgtgccaagacaccggtgccggtcctgcaggtgctgtggatcacc
ccgctgcgggcgctggccgccgataccgcgcgcgcgctgcgcgagcctttggacgccctc
gggctggactggcaggtcggcctgcgcaccggcgatgccagcgcgcgcgacaagcgactg
gcgcgcgagggtcggctggatgtgctggtgaccacgcccgagtcactggccctgctgctc
agctaccccgacacgatggcccgcctgcagcacctgcgctgcgtggtcgtggatgaatgg
catgaactgctgggcaacaagcgcggcgtactgctgcagttgaatctgcgtcgcctgcgc
gacgccctgcccgccctgcaggtatgggggctgtcggccacgctgggcaatctggaggag
gcgcgcgaggtgctgttgcccgacgtgcccgacgcgccgctggtggccggcgcacgcccg
cgtccagtcagcgtggaaacactgctgccggcgcagggcgagcgttttccctgggccggc
cacctgggcttgtcgcagctgcagcgcgtgctggagaagctgctcacggtgcgcaccagc
ctgttgttcaccaacacccgcgcccatgccgaactctggcaccaggcactggcggcagtg
tggccggaagacccggataccctcgcactgcatcatggctcactggacccggcgttgcgc
cgcgccgccgagcagggcctgcgcgaaggccgcctgcgctgcgtcgtcgccacctccagc
ctggatctcggcgtcgatttccccagtgtcgaccaagtgctgcagatcggcagccccaag
ggcatcgcgcggctgctgcagcgtgccgggcgcgccaggcatcgccccggcgaatccggg
cacatcgtgtgcgtgccctcgcacgcgctggagctggtggagtatgccgccgcgcgtcgc
gcgctggcccaggggcacatcgaagcccgccggccgctgcgattgtcgctggatgtgttg
gcgcagcacgcggtgagctgcgcgttgggcggcggcttcgctccggacgcgctgctggag
caggtgcggcgcacgcacgcgttcgccgggctggacagcacgcactgggaggccgtgctc
gagttcatcgtgcagggcggccgcgcgctgtcgcagtacccggacttccacaaggtggtg
cgcgatgacgatggcatctaccgcgtgcacgaccgtcgcgtcgcgctgcggcaccggctg
tcgatcggcaccatcaccagcgatggcagtgtcatggtgcagttcctgcgcggcggccgg
ctgggtgcggtggaggagcagttcctcagccggctgcgccccggtgatcgcttccagttc
gccggtcgcctgctggaactggtgcggctggagaacctgaccgcgtatgtgcgcctggcc
cggggcggcgatggcgtggtgccgcgctggcagggcggccggctgccactgtccgacgcg
ctgggccatgaaatggaaacggtgctggcccgccctgccgacagcccggagatgcgctgg
ctggcgccgctgctggccctgcagacgcgcctgtccgcactgcccggtccggagctgctg
ctggtggaacacgtgcggcgtcgcgatggccagttcgtcttcgtgtatcccttcgccggt
cgccaggtcaatgaagggctggccgcgctgatggcattgcgctggacgcggcagcacagc
aataccttcggctacgcggccaacgactatggcttcgtgctcgcaccggcgcgcccggtc
gaactcgatgcagcgcgcgtgcgcaccctgctggcaccggagggactgctcaccgatctg
cgcgagagcctcaacctgggtgaactggcgcggcgccagttccgcgatatcgcgcgggtg
tcaggcatgctcgtacctgcactgcccggccgcacaccgcgcagcctgcgccagctgcag
gcctccagcgggctgctgtacgacgtgctgcgacagcacgatccggaccacatcctgctg
acgttggccgaacacgaagtgctgcacgatcaactcgatctggcaagcctggcgcgtgcg
ctgtcgaggtgtcaggcccgcacgctgagcgtgcagcatccgaccagcctgggaccgttg
tctttcccgctctgggcggaacggttgcgcggccagctcagcaacgaagactggaagacc
cgcgtcctgcgcgccgcacagcaactggagaagcgccatggcgcctga

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