Stenotrophomonas sp. LM091: BIZ42_12345
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Entry
BIZ42_12345 CDS
T04630
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
slm
Stenotrophomonas sp. LM091
Pathway
slm00300
Lysine biosynthesis
slm00550
Peptidoglycan biosynthesis
slm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
slm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BIZ42_12345
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BIZ42_12345
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
slm01011
]
BIZ42_12345
Enzymes [BR:
slm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
BIZ42_12345
Peptidoglycan biosynthesis and degradation proteins [BR:
slm01011
]
Precursor biosynthesis
Amino acid ligase
BIZ42_12345
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
PreAtp-grasp
Motif
Other DBs
NCBI-ProteinID:
AOX62924
UniProt:
A0A1D8YBE6
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Position
2841499..2843001
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AA seq
500 aa
AA seq
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MSQTMLLSQLLPDVALSHDPTLTGLVLDSRAVRPGNAFVAIAGFGAHGLGFVDQARANGA
AAILFDPPAPAELPAPADAIAVPGLRNRMGAMADQFHGHPSRAMTMVGVTGTNGKTSTVQ
LLAQAWHLLGTASGSIGTLGVGLYGNVVPTGFTTPLVLQMHEVLAQLRDAGAQAVAMEVS
SHALDQGRVDAVHYDVAVFTNLTRDHLDYHGDMAQYGAAKARLFHRDGLKAAVVNLDDSF
GSELLRTVGASVRPIGVSSRGAAQATLRADSLTLDGRGIAFDLVVDGQRHPVQSPLLGRF
NVDNLLAVAGALYALDHIPAAIAALLSQLQPIAGRMNRLGGEGGLPTVVVDYAHTPDALE
QALTSVQGHLAGRLVCVFGCGGERDTGKRPQMAAIAEQHADVVIVTDDNPRGEDGDVIVA
DILKGFDAPAAVTVQRDRAAAIAAAIGQAGAGDIVLIAGKGHEPYQEIDGVKHAFDDTEV
AGRVLAARVDNAGTLRREAP
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagccagacgatgttgctttcgcagttgcttcccgatgtggcactgagccacgatccg
accctcaccggcctggtgctggacagccgcgcagtgcgcccgggcaacgccttcgtggcg
atcgccggtttcggcgcgcacgggctggggtttgtcgaccaggcgcgcgccaatggcgct
gcagcgatcctgttcgacccgccggccccggccgagctgccggcgccggccgatgcgatc
gccgtgccgggtctgcgcaaccgcatgggcgcgatggccgaccagttccacggccatccc
tcgcgcgcgatgacgatggtcggggtgaccggcaccaacggcaagacgtccaccgtgcag
ctgctggcccaggcctggcacctgctcggcaccgccagtggcagcatcggcacgctgggc
gtgggtctgtacggcaacgtcgtgccgaccgggttcaccacgccgctggtgctgcagatg
catgaggtgctggcgcagctgcgcgatgccggcgcccaggccgtggcgatggaagtcagc
tcgcacgcgctcgaccagggccgcgtggacgccgtgcattacgacgtggcggtgttcacc
aatctcacccgcgaccatctcgactatcacggtgacatggcgcagtacggtgcggccaag
gccaggctgttccaccgcgatggtctgaaggctgccgtggtcaacctcgatgacagcttc
ggcagcgagctgctgcgcaccgtcggcgcgagcgtccgcccgatcggcgtcagctcgcgc
ggtgccgcacaggccaccctgcgcgccgattcgctcaccctggatgggcgcggcatcgcc
ttcgacctggtggtcgacggccagcgccatccggtgcagtcgccgctgctcggtcgtttc
aacgtggacaacctgctggccgtagccggtgcgctgtatgcgctggaccacatcccggcc
gcgatcgccgcgctgctctcgcagctgcagccgattgccggccgcatgaaccgcctgggc
ggcgagggtgggctgcccaccgtggtggtcgattacgcccacaccccggatgcgctggaa
caggccttgaccagcgtgcagggccatctggccggccgcctggtctgcgtgttcggctgc
ggcggcgagcgcgataccggcaagcgcccgcagatggccgccatcgccgaacagcatgcc
gacgtggtgatcgtcaccgacgacaatccgcgcggcgaagacggcgacgtgatcgtggcc
gacatcctcaagggatttgacgcacccgcggcggtcaccgtgcagcgcgaccgtgccgcc
gcgatcgctgctgcgatcggccaggccggcgcgggcgacatcgtgctgatcgccggcaag
ggacatgagccctaccaggagatcgacggggtcaagcacgccttcgacgacaccgaggtg
gccggccgagtgctggccgcgcgcgtagacaacgcgggcacgctgcgcagggaggcccca
tga
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