Salipaludibacillus sp. LMS25: MM221_20360
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Entry
MM221_20360 CDS
T08296
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
slms
Salipaludibacillus sp. LMS25
Pathway
slms00521
Streptomycin biosynthesis
slms00523
Polyketide sugar unit biosynthesis
slms00541
O-Antigen nucleotide sugar biosynthesis
slms01100
Metabolic pathways
slms01110
Biosynthesis of secondary metabolites
slms01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
slms00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
MM221_20360 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
MM221_20360 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
MM221_20360 (rfbC)
Enzymes [BR:
slms01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
MM221_20360 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
ADPRTs_Tse2
Motif
Other DBs
NCBI-ProteinID:
UTR17100
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Position
complement(4328105..4328650)
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AA seq
181 aa
AA seq
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MKTIDTLFSEVKVVIPTIFEDGRGFFSEVYNEQTFKEAGIELNVIQDNQSLSRRKGTLRG
LHYQLHPKAQSKLVRVVRGSIYDVAVDIRRSSPTFGKWFGVELSAQNKKQLLVPAGFAHG
FCTLEENTEVIYKVDASYAPELEGGIIWNDKELAIDWPVETPTLSEKDEQLPTLANAKLF
D
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacgatcgatacactttttagtgaagtgaaagttgttattcctactatctttgaa
gatggtcgtggattcttttctgaggtatataatgaacaaacatttaaagaagccggtatt
gagttaaatgtcatccaagataatcagtcattatctcggagaaaagggactttgcgcggc
ttacattatcaactgcacccaaaagcacaaagtaagttagttcgtgttgtgagaggcagt
atttatgatgtggctgtggatattcgccgatcatctcctacatttggtaagtggtttggt
gttgaattatctgcacaaaataaaaaacaattattagttccagccggttttgcccatgga
ttttgtacgttagaggagaacacagaggtcatttacaaagtggatgcctcctatgctcct
gagcttgaagggggcatcatttggaatgataaagagttagcgattgactggcctgtggag
acccctactttatctgaaaaagacgagcaattacctacattagcaaatgccaaattattt
gattaa
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