Shewanella loihica: Shew_0721
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Entry
Shew_0721 CDS
T00489
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K02005
HlyD family secretion protein
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
Shew_0721
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GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
HlyD_2
Biotin_lipoyl
Biotin_lipoyl_2
TetR_C_2
Motif
Other DBs
NCBI-ProteinID:
ABO22593
UniProt:
A3QAU5
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Position
821137..822399
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AA seq
420 aa
AA seq
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MIKDTSAQDKQVAPSLGRRIKWPVTIGAGVLLVSGLVWASVSGSSVSESIDRSELRFATL
ERGTLVRDIASTGKIVAANAPILYAPEKGTVTLIANPGDKVEQGQVVATIESHSLTNNLK
QQQALLEGMQSSLERARLDARRDQLKAIQTLDMAKVDLEAADRESRRGDQLIESSLISKI
DYEKSKDELHKAKLLYAHAQQEAELMKDTLSFELKNKASEVDRQALVVAELERQVAALNI
TAPVGGIIGNWLTEQKARIGQSQPILTVVDLSAFEAELAVPESYADELGIGMDVELNFGG
QLVMGKLSAISPEVRNREVTTRVRFEQQAALHLRQNQRLSARVLLENRPDVLMVKRGPFV
NSGGGTLVYAVKNDLAERTEIQLGARSMSHIEVVSGGEVGDQWIISSTDAFKNAEQVLIR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagataccagcgcacaagataagcaagttgcccccagcctcggacgccgcatc
aaatggcctgtcactatcggcgcaggcgttctcctggtttctggtctggtgtgggccagc
gtcagtggcagcagcgtgagcgagtctatcgaccgtagcgagctgcgttttgccactctg
gaacgcggcaccttagtgcgtgatatcgcctctaccggcaagatagtcgccgccaacgcc
cctatcctctacgccccagagaagggcacggtaaccttaatcgccaacccgggtgacaag
gtggagcagggccaggtggttgccaccatagagagccacagcctgaccaacaacctcaag
cagcagcaggcgctgctggaagggatgcagagcagccttgagcgtgcccgtctcgatgcc
cgtcgtgatcagcttaaggcgatacagaccctggatatggccaaggtggatctcgaggcg
gcggatcgcgagagtcgccgtggcgaccagctgatcgagtccagcctgatctctaagata
gattatgagaagagcaaggatgagctgcacaaggccaagctgctctacgctcacgcccag
caggaagccgagctgatgaaagataccctcagcttcgagctgaagaacaaggcctcagag
gtggatcgtcaggccctggtggtcgccgagcttgaacgtcaggtggcggcgctgaacatc
acggcccccgtcggcggcatcataggtaactggctgaccgagcagaaggcccgtatcggc
cagagccagcccatattgaccgttgtggatctcagcgccttcgaggccgagctggcggtg
ccagaatcctacgccgacgagctggggattggcatggatgtcgagcttaacttcggcggc
cagctggtgatgggcaaactgtcggccatctctcccgaggtgcgcaaccgtgaggtgact
acccgagtgcgcttcgagcagcaagctgccctgcacctgcgtcagaaccagcgtctgtcg
gcccgcgtcttactggaaaatcgtcccgacgtgctcatggtcaagcgtggccccttcgtc
aacagtggcggcggcaccctggtctatgccgtcaagaacgacctggccgagcgcaccgag
atccaactgggtgcccgcagcatgagccacatagaggtggtctcgggcggtgaggtcggc
gaccagtggattatctcctccaccgacgcctttaagaacgccgaacaagtattgatccgc
taa
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