Shewanella loihica: Shew_2348
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Entry
Shew_2348 CDS
T00489
Name
(GenBank) two component transcriptional regulator, winged helix family
KO
K07660
two-component system, OmpR family, response regulator PhoP
Organism
slo
Shewanella loihica
Pathway
slo01503
Cationic antimicrobial peptide (CAMP) resistance
slo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Shew_2348
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
Shew_2348
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
slo02022
]
Shew_2348
01504 Antimicrobial resistance genes [BR:
slo01504
]
Shew_2348
Two-component system [BR:
slo02022
]
OmpR family
PhoQ-PhoP (magnesium transport)
Shew_2348
Antimicrobial resistance genes [BR:
slo01504
]
Gene sets
CAMP resistance modules
Cationic antimicrobial peptide (CAMP) resistance, protease PgtE [MD:
M00744
]
Shew_2348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
FleQ
Motif
Other DBs
NCBI-ProteinID:
ABO24214
UniProt:
A3QFG6
LinkDB
All DBs
Position
2742497..2743171
Genome browser
AA seq
224 aa
AA seq
DB search
MRILVVEDDPLLSHHLKVQLSELGNQVQVAQTAKEGFYQATNYPIDIAIIDLGLPDQDGI
SLIQSLRKAELKAPILILTARVNWQDKVEGLNAGADDYLVKPFQKEELVARLDALVRRSA
GFVKPQITSGPLELDLAAKQVTLDQSPMEVTAFEYQILEYLMRHCHEVVAKQRLLDVIYG
DKEGDPNTIEVMVSRLRKKLTKGGLENPIATIRGQGYKFNLPCK
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgagaattttggtcgttgaagatgatcccctactgtcccaccacctcaaggtacaactg
agcgagttaggcaaccaggttcaagtcgcccagaccgccaaagaaggcttctatcaagcg
actaactatcccatagacattgccatcatagaccttggcctgccggatcaagacggtatc
tcgctgatccagtcgctgcgcaaggccgaactcaaggcgcctattctcatcctcaccgcc
cgggttaactggcaggataaggtcgaggggctcaacgccggcgccgacgactatctggtg
aagcccttccaaaaagaggagctggtcgccagactcgacgccctggtgcgtcgcagtgcg
ggcttcgtcaaaccgcagatcaccagcggaccgttggaactggacttggccgccaaacag
gtcacgctggatcagagccccatggaggtgaccgcgttcgaatatcagatccttgaatac
ctgatgcgccactgtcacgaggtggtggccaaacagcgactactggatgtgatctatggc
gataaggaaggcgatcccaacaccattgaagtaatggtcagccgtctgcgcaagaaactg
accaagggcggactagaaaaccccattgccaccattcgtggtcagggctacaagtttaat
ctgccatgcaaataa
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