Streptomyces longhuiensis: LGI35_37800
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Entry
LGI35_37800 CDS
T09038
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
slon
Streptomyces longhuiensis
Pathway
slon03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
slon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LGI35_37800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slon03400
]
LGI35_37800
Enzymes [BR:
slon01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LGI35_37800
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LGI35_37800
DNA repair and recombination proteins [BR:
slon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LGI35_37800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
zf-TFIIB
Ribosomal_S13
NFACT_N
YhfH
Motif
Other DBs
NCBI-ProteinID:
UDM03596
LinkDB
All DBs
Position
8296948..8297808
Genome browser
AA seq
286 aa
AA seq
DB search
MPELPEVEALTDFLTEHLVGHEIVRVLPVAVSVLKTYDPPPAALEGRTVTGVTRHGKFLD
LDADGLHLVTHLARAGWLHWKDRLPDGAPRPGRGPLALRVALEDGEGFDLTEAGTQKSLA
VYVVHDPADVPGIARLGPDPLADGFDEARFAALLDGERRQIKGALRDQSLIAGIGNAYSD
EILHAAKMSPFKLASSLTADDVSVLHKALRDTLTEAVERSRGVAAGRLKAEKKSGLRVHG
RAGEKCPVCGDTIREVSFHDSSLQYCATCQTGGKPLADRRMSKLLK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacttcccgaggtcgaagcgctgacggacttcctcaccgagcatctggtgggg
cacgagatcgtccgcgtcctgcccgtcgccgtgagtgtcctgaagacgtacgacccgccg
cccgccgccctggagggccgcacggtcacgggcgtgacgcggcacggcaagttcctcgac
ctcgacgcggacgggctgcacctcgtcacgcacctcgcccgcgcgggctggctccactgg
aaggaccggctccccgacggcgcgccgcgccccggcagaggaccgctcgccctgcgcgtc
gccctggaggacggggagggcttcgacctcaccgaggcgggcacccagaagagtctcgcg
gtgtacgtcgtccacgacccggccgatgtcccaggcatcgcgagactcggccccgacccg
ctcgccgacggcttcgacgaggcgcgcttcgccgccctcctggacggcgagcggcggcag
atcaagggggcgctgcgcgaccagagcctcatcgcgggcatcgggaacgcgtacagcgac
gagatcctgcacgccgcgaagatgtcccccttcaagctcgcgtcgagcctgaccgccgac
gacgtgtcggtcctccacaaggccctgcgcgacacgctgaccgaggccgtcgagcgctcc
cgcggcgtcgcggccgggcggctcaaggccgagaagaagagcgggctgcgggtgcacggc
agagcgggcgagaagtgcccggtgtgcggcgacacgatccgcgaggtgtccttccacgac
tcgtcgctccagtactgcgcgacctgccagacgggcggcaagccgctcgcggaccgcagg
atgtcgaagctcctgaagtga
DBGET
integrated database retrieval system
