Streptomyces lincolnensis: SLINC_2554
Help
Entry
SLINC_2554 CDS
T04801
Name
(GenBank) bi-functional protein (secreted alpha-amylase/dextrinase)
Organism
sls
Streptomyces lincolnensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
PUD
Pullul_strch_C
Pullulanase_N2
CBM_48
DUF5696
Motif
Other DBs
NCBI-ProteinID:
ANS64778
UniProt:
A0A1B1M815
LinkDB
All DBs
Position
complement(3028277..3033670)
Genome browser
AA seq
1797 aa
AA seq
DB search
MIPRWPAPPRRRTHRAGRVAAVTVTALTAALVQPLAARADTPPAPPSDAKLAKAEARHDL
TREQFYFVLPDRFANGDTSNDRGGLTGSRLTTGHDPTDKGFYQGGDLKGLTQRLDYIKGL
GTTALWMAPIFKNRPVQGAGAGGTSQAIGTGGASAGYHGYWITDFTQVDPHFGTNKDLET
LISKAHAKGMKVFFDVITNHTADVVDYEEKSYDYLSKGAFPYLTKDGEPFDDADYADGTK
DFPDVDTDSFPRTPEATAGTKVPSWLNDPTMYHNRGDSTFAGESSAHGDFSGLDDLWTER
PEVVGGMERIYRRWVRDFDIDGFRIDTVKHVDMEFWTQWATALDAYAAQQGRDDFFMFGE
VYSADTDVTAPYVTQGRLDATLDFPFQEAARQYASQGGSARKLASVFGDDYKYTTGRANA
YEQVTFLGNHDMGRIGHFLKQDNPRATDAEILAKDRLANELMFLSRGNPVVYYGDEQGFT
GAGGDKDARQPLFASRTADYLDDDEIGTDRTHASDAYDPGAPLYRQIGALSKLRKANPAL
TDGVQTERYAADGPGVYAFSRTDARAGTEYVVAFNNADEPRTATFATGSANMTFKGIHGG
AASVTSDADRKITVTVPAGSAIVLKAAGPLAAPATKPTITVGAPATGATGTVDITADVDG
GQLNRVVFAAQVGNGRWQTLGSADHAPYRVTQTLGKDVPAGTALRYKAVVIDSAGRTASA
TASSATGTPPVEEPPSASSRDYAVVHYKRADGDYRNWGLHVEGERHPFIGRDAYGAFAYV
KLKPGATALDFLIVDAQGNRDVDGERTIDLTRTGEIWTEQGEEAVRTERPDHPAQDETRA
ILHYHRDDGDYDGWGLHVWTGAAHPTDWSNPLKPVRTDAYGAVFEVPLNDGASSLSYIVH
KGDEKDLPTDRSLDLTADGHEVWLMSGQEKHLLPQPAGSAAALDLTTSKAVWIDRNTLVW
NGSEAAASTQLLSSRNGSITVDRGTLTSDDERWLRLTKTALTDAQKAGFPHLKDHTAWSV
DPRDRERVKEALTGQLVASQRAANGAVLAATGVQIAGALDDLYPAATKAELGPTFHDGRP
TLAVWAPTAQSVRLELDGSTTTMRRDDTTGVWSVTGPRSWKNKPYRYVVKVWAPSVGKVV
TNKVTDPYSVALTTDSERSLVADLDDRSLAPRGWSTYTKPKPVPLKDAQIQELHVRDFSV
ADRTATDPGTYLAFADRASDGSEHLRRLAKAGTSYVHLLPAFDIATIPEKKSEQATVDCD
LAAFPADSGRQQECVAEVAAKDAYNWGYDPYHYTVPEGSYATDPDGTARTVEFRTMVKAL
NEDGLGIVMDVVYNHTAASGQARTSVLDRIVPGYYQRLLADGSVANSTCCANTATENAMM
GKLVVDSVVTWAREYKVDGFRFDLMGHHPKANILAVRKALDALTPAKDGVDGKKIILYGE
GWNFGEVADDARFPQATQKNMAGTGVATFSDRARDAVRGGGPFDEDPGVQGFASGLYTDP
NASGNNGTPEEQKARLLHYQDLIKVGLSGNLADYRFTDTDGRRVKGSEVDYNGRPAGYAD
APGDALAYADAHDNESLFDALAFKLPASTGAADRARMQVLAMATATLSQGPALSQAGTDL
LRSKSLDRNSYDSGDWFNAIHWNCADGNGFGRGLPPAADNAAKWPYAKPLLSAVKVGCPQ
IEGASAAYRDLLRIRTTEPVFSLGTSAQVQSKLSFPLSGKDETPGVITMELGELVVVFNA
TPTRREQRIEALAGTAYALHPVQKAGADSTVGSSSYERVSGTFAVPGRTVAVFSRTS
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
gtgataccgagatggccggcgccgcccagacgccgtacccaccgtgccggacgggtcgcc
gcggtcaccgtgaccgcgttgaccgcagcgctcgtccagcctctcgcggcccgggccgac
accccgcccgcgcccccgtccgacgcgaagctggcgaaggccgaagcccgccacgacctg
acccgcgagcagttctacttcgtcctgccggaccgtttcgccaacggggacacctccaac
gaccggggcggcctgaccggttcgcgtctcaccaccggtcacgaccccaccgacaagggc
ttctaccagggcggcgacctcaagggcctgacccagaggctcgactacatcaagggcctc
ggcaccaccgccctgtggatggccccgatcttcaagaaccggcccgtgcagggcgccggc
gctgggggtacctcccaggctattggcactgggggagcctcggccggctaccacggttac
tggatcaccgacttcacccaggtcgacccgcacttcggcaccaacaaggacctcgaaacc
ctcatctccaaggcccacgccaagggcatgaaggtcttcttcgacgtcatcaccaaccac
accgccgacgtggtcgactacgaggagaagtcctacgactacctctccaagggcgcgttc
ccgtacctgacgaaggacggcgagcccttcgacgacgccgactacgcggacggcacgaag
gacttcccggacgtcgacaccgactccttcccgcgcacgcccgaggccaccgccggcacc
aaggtcccgtcatggctcaacgacccgacgatgtaccacaaccgcggcgactccaccttc
gccggtgagagctccgcgcacggcgacttctccggcctcgacgacctgtggaccgagcgt
cccgaggtcgtcggcggcatggagaggatctaccggcgctgggtcagggacttcgacatc
gacggcttccggatcgacaccgtgaagcacgtcgacatggagttctggacccagtgggcc
accgccctcgacgcctacgcggcccagcaggggcgcgacgatttcttcatgttcggcgag
gtctactccgccgacacggacgtcaccgcgccctacgtcacccagggccgcctcgacgcc
accctcgacttccccttccaggaggcggcacggcagtacgcctcccagggcggcagcgcc
cgcaaactcgcctcggtcttcggcgacgactacaagtacacgaccggccgggccaacgcc
tacgagcaggtcaccttcctcggcaaccacgacatgggccgcatcgggcacttcctgaag
caggacaaccccagggccacggacgcggagatcctcgccaaggacaggctcgccaacgag
ctgatgttcctcagccgcggcaaccccgtcgtctactacggcgacgagcagggcttcacc
ggagcgggcggcgacaaggacgcccgccagcccctgttcgcctcccgcaccgccgactac
ctcgacgacgacgagatcggcaccgaccgcacccacgcgagcgacgcctacgaccccggc
gcgccgctgtaccggcagatcggcgccctgtccaagctccgcaaggccaacccggcgctg
accgacggcgtacagaccgagcggtacgcggcggacgggcccggcgtctatgccttctcc
cggaccgacgccagggcgggcaccgagtacgtcgtcgccttcaacaacgccgacgagccc
cggacggccacgttcgcgaccggctcggcgaacatgacgttcaaggggatccacggcggt
gccgcgtcggtcacctccgacgccgacaggaagatcaccgtcaccgtccccgccggctcc
gcgatcgtcctcaaggccgccggaccgctcgccgcacccgccacgaagccgacgatcacc
gtcggggccccggccaccggcgccaccggcacggtcgacatcaccgccgacgtggacggc
ggacagctcaaccgggtcgtcttcgccgcgcaggtcggcaacggcagatggcagaccctc
ggctccgccgaccacgccccctaccgggtcacccagaccctcggcaaggacgtaccggcc
ggaacggccctgcgctacaaggcggttgtgatcgactcggcgggccggacggcctcggcc
acggcctcctccgcgaccggcaccccgcccgtcgaggagcccccgtccgcctcctcccgc
gactacgcggtcgtccactacaagcgtgccgacggcgactaccggaactggggcctgcac
gtggagggcgagcgccatccgttcatcggccgggacgcctacggcgccttcgcctacgtc
aagctcaagcccggcgccacggccctcgacttcctcatcgtcgacgcgcagggcaaccgg
gacgtcgacggcgagcgcacgatcgacctcacgaggacgggcgagatctggacagagcag
ggcgaggaggccgtgcgcaccgagcggccggaccacccggcccaggacgagaccagggcg
atcctgcactaccaccgcgacgacggcgactacgacggctggggactgcacgtctggacg
ggcgccgcgcaccccaccgactggtcgaacccgctgaagccggtccggaccgacgcctac
ggcgccgttttcgaggtacccctcaacgatggtgcgagcagcctcagctacatcgtccac
aagggcgacgagaaggacctccccaccgaccggtcgctcgacctcaccgccgacggccac
gaggtgtggctgatgagcggccaggagaagcacctgctcccgcagcccgccggctccgcc
gccgcgctagacctgaccacctccaaggcggtctggatcgaccggaacacgctcgtctgg
aacggctccgaggcggccgcctccacccagctgctgtcctcgcgcaacggctcgatcacc
gtggacagggggaccctgaccagcgacgacgagcgatggctacggctcaccaaaaccgct
ctcaccgacgcccagaaggccgggttcccgcacctgaaggaccacaccgcctggtccgtc
gacccccgcgaccgcgagcgcgtcaaggaggccctcaccggacagctcgtcgcctcccaa
cgggccgcgaacggcgccgtactggcggcgaccggcgtccagatcgccggcgcactcgac
gatctgtacccggcggcgaccaaggccgagctgggcccgaccttccacgacggccgtccc
accctggccgtctgggcgccgaccgcgcagtccgtgcggctggaactcgacggctccacg
acgacgatgcggcgggacgacaccaccggcgtctggtccgtcaccggccccaggtcctgg
aagaacaagccctaccggtacgtcgtgaaggtctgggcgcccagtgtcggcaaggtggtc
accaacaaggtcaccgacccctactcggtcgccctcaccaccgactccgagcgcagcctc
gtcgccgacctggacgacaggtcgctggccccgcgcggctggtcgacgtacaccaagccc
aaaccggtaccgctgaaggacgcccagatccaggagctgcacgtccgggacttctccgtc
gccgacaggacggccaccgatcccggcacctatctcgccttcgccgacagggcgagcgac
ggctccgagcacctgcgtcggctcgcgaaggcgggcacgtcgtacgtccatctcctgccc
gcgttcgacatcgccaccatcccggagaagaagtccgagcaggcgaccgtcgactgcgac
ctggccgccttcccggccgactccggccggcagcaggagtgcgtggccgaggtcgccgcg
aaggacgcctacaactggggctacgacccgtaccactacacggtccccgagggctcgtac
gcgacggaccccgacggcacggcccgtaccgtcgagttccgcacgatggtcaaggcgctc
aacgaggacggcctcgggatcgtcatggacgtcgtctacaaccacacggccgccagcggc
caggcgcggacgagtgtcctcgaccggatcgtccccggctactaccagcggctcctcgcc
gacggctcggtggcgaacagcacctgctgtgccaacaccgccaccgagaacgccatgatg
ggcaagctggtcgtcgactcggtcgtcacctgggccagggagtacaaggtcgacgggttc
cgcttcgacctcatgggccaccaccccaaggccaacatcctggcggtccgcaaggcgctc
gacgcgctcacgcccgccaaggacggcgtcgacggcaagaagatcatcctgtacggcgag
ggctggaacttcggggaggtcgccgacgacgcccggttcccgcaggccacgcagaagaac
atggcgggaaccggcgtcgcgaccttctccgaccgggcgcgggacgccgtgcgcggcggc
gggcccttcgacgaggatccgggcgtccagggcttcgcctcggggctgtacaccgacccc
aacgcgtccgggaacaacggcacgccggaggagcagaaggcccgcctcctgcactaccag
gacctgatcaaggtcggactgtccggcaatctcgccgactaccgcttcaccgacaccgac
ggcaggcgggtcaagggctccgaggtcgactacaacggccggcccgccggctacgcggac
gcacccggcgacgccctcgcctacgccgacgcgcacgacaacgagtcgctgttcgacgcg
ctggccttcaaactgcccgcctcgaccggcgccgccgaccgggcccggatgcaggtcctc
gccatggcgacggccaccctctcgcagggtcctgccctctcccaggcgggcaccgacctg
ctgcgctccaaatccctggaccgcaactcctacgacagcggcgactggttcaacgcgatc
cactggaactgcgccgacggcaacggcttcggccgcggactgccgccggccgccgacaac
gccgccaagtggccttacgccaagcccctgttgagtgccgtgaaggtcggctgcccgcag
atcgagggggcctcggccgcgtaccgggacctgctcaggatccgtacgacggagccggtc
ttctcgctcggcacgtccgcccaggtgcagtcgaagctctccttcccgctgtcggggaag
gacgagacacccggagtgatcaccatggaactcggtgaactcgtcgtcgtgttcaacgcg
acaccgacccggcgggaacagcggatcgaggcgctggccggaacggcatatgccctgcac
ccggtacagaaagcgggtgcggactctaccgtcggatcgtcgtcctacgaacgggtttcg
ggcaccttcgccgttcctggccggaccgtggccgtattctcccgtacttcgtga
DBGET
integrated database retrieval system
