Sideroxydans lithotrophicus: Slit_2298
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Entry
Slit_2298 CDS
T01196
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
slt
Sideroxydans lithotrophicus
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slt03009
]
Slit_2298
Enzymes [BR:
slt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Slit_2298
Ribosome biogenesis [BR:
slt03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Slit_2298
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
Met_10
Methyltransf_23
Methyltransf_11
UPF0020
Methyltransf_15
MTS
Cons_hypoth95
Methyltransf_32
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
ADE12526
UniProt:
D5CLT1
LinkDB
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Position
complement(2326308..2327606)
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AA seq
432 aa
AA seq
DB search
MNSVMIESLDHEGRGIAHADGKVIFIEGALTGERVTYSSYRKKNNYEQAKVDLILKQSFM
RVQPKCPVFGVCGGCSMQHLDPRAQVAVKQRVLEDNLQRIGKVKPEVVLPPIYGQPWGYR
QRARLSVRHVLKKEKTLVGFREQNGKYVADMQHCEILTPKIASLLPLLGELNEKFTARDI
IPQIEVAVGEFVDVLVLRILAALSPSDEALIREFADKHQVQFWTQTKGPETVAPFYPLDA
PSLSYSLPEFGITMPFAPTEFTQVNSDMNRLMVSRAMRLLAPQAGERIADFFCGLGNFTL
PIARSGAQVLGIEGSDALVRRARQNAEYNGLSGNTTFQMMNLFEMDEATLARAGRFDKWL
VDPPRDGAIELMKSISEATAPRRIVYVSCSPSTLSRDAEVLVHAKGYSLKAAGVMNMFPQ
TSHVESIAVFDL
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaattccgtaatgattgaatctctcgaccacgaaggtcgcggcatcgcgcatgccgat
gggaaggtgatcttcatcgaaggtgcgctgaccggcgaacgcgtgacctattcctcgtat
cgcaaaaaaaacaactacgaacaggcaaaggtcgatctgatactgaagcagtcgttcatg
cgtgtgcagccgaaatgtccggtcttcggtgtgtgcggcggctgttccatgcagcatctg
gacccgcgtgcgcaagtggccgtcaagcagcgcgtgctggaagacaatctgcagcgcatc
ggcaaggtcaagcccgaagtcgtgctgccgcctatctatggccagccgtggggctatcgc
cagcgcgcgcggctttcggtgcggcatgtgctgaagaaagagaaaacgctggtcggtttc
cgcgaacagaacggcaagtatgtggcggatatgcagcactgcgagatactgacgcccaag
atcgccagcctgttgccgttgctgggcgagctgaacgagaaattcacggctcgcgacatc
attccgcagatcgaggtggcggtcggcgagttcgtcgatgtgctggtgctgcgcatcctt
gctgcgctctcaccctcggatgaggcgttgatcagggaatttgccgacaagcatcaggtg
cagttctggacccagaccaaggggccggagacggttgctccgttctatccgctggatgca
ccgtccttgagctatagcctgcccgaatttggcatcaccatgccgtttgcgccgaccgaa
tttacccaggtgaacagcgacatgaaccgcctgatggtcagccgcgccatgcgcctgctc
gctcctcaagccggcgaacgcatcgcagatttcttttgcggcctgggcaatttcacgctg
ccgatagcgcgcagcggagcgcaggtgctgggtatcgagggcagcgatgcattggtgcgg
cgcgccaggcagaacgccgaatacaacggactatccggcaacacgacgttccagatgatg
aacctgttcgagatggatgaggcgactctggcgcgagccggaagattcgacaaatggctg
gtcgatccgccgcgcgacggcgcgatcgagctgatgaaatccatcagtgaagcgactgcg
ccacgccggatcgtctatgtctcctgcagcccttccacgctgtcacgcgatgccgaagtg
ctggtgcatgcaaaaggctacagcttgaaagccgcgggagtgatgaacatgttcccgcag
acctcgcatgtggaatcgattgcggtctttgatctgtaa
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