Sideroxydans lithotrophicus: Slit_2541
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Entry
Slit_2541 CDS
T01196
Name
(GenBank) Lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
slt
Sideroxydans lithotrophicus
Pathway
slt00330
Arginine and proline metabolism
slt01100
Metabolic pathways
slt01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Slit_2541
Enzymes [BR:
slt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
Slit_2541
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ADE12766
UniProt:
D5CN69
LinkDB
All DBs
Position
complement(2576206..2578452)
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AA seq
748 aa
AA seq
DB search
MKFNFPIIIIDEDFRSENASGHGIRALAQAIEKEGIEVVGMTSYGDLTSFAQQQSRASAF
VLSIDDEEFGGGSVEETEVALRTLRAFVEEIRFKNADIPIYLYGETRTSRHIPNDILREL
HGFIHMHEDTPEFVARHMIREAKSYMDSLAPPFFRALVDYAQDGSYSWHCPGHSGGVAFL
KSPVGRMFHQFFGENMLRADVCNAVDELGQLLDHTGPVAASERNAARIFNADHLFFVTNG
TSTSNKIVWHSMVAPDDIVVVDRNCHKSILHAIMMTGAVPVFLTPTRNNFGIIGPIPKSE
FEMANIQKKIDANPFIKDKKKKPRILTITQSTYDGVLYNVETLKEMLDGRIDALHFDEAW
LPHAAFHDFYKDMHAIGRDRPRAKESMVFSTQSTHKLLAGLSQASQILVRDSESRKLDRD
CFNEAYLMHTSTSPQYAIIASCDVAAAMMEPPGGTALVEESIAEALDFRRAMRKVDAEFG
TDWWFKMWGPDYLSEEGMAEREDWVLRADDRWHGFGKLAEGFNMLDPIKATVVTPGLDVD
GDFADSGIPASIVTKYLAEHGVVVEKCGLYSFFIMFTIGITKGRWNSMVTELQQFKDDYD
KNQPLWRVLPEFIAKNPRYEKIGLRDLCDQIHGIYKANDVARLTTEMYLSSMVPAMKPSD
AFAKMAHGEIERVSIDDLEGRVTAVLLTPYPPGIPLLIPGERFNKTIVDYLKFAREFNKK
FPGFETDIHGLVAEKSNGERVYYVDCVK
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcaatttcccaatcatcatcatcgacgaggattttcgctcggagaacgccagc
ggccacggtatccgcgcgcttgcccaggccatcgagaaagagggcatcgaagtcgtcggc
atgaccagctacggcgacctgacctcgtttgcgcagcagcagagccgcgcatcggctttc
gtgctgtccatcgacgatgaggagttcggtggcggcagtgtggaagagacggaagtcgcc
ttgcgcaccttgcgcgcattcgtcgaagagatccgcttcaagaacgccgacatcccgatc
tacttgtacggcgagacgcgcacttcgcgccacatcccgaacgacattctgcgcgagctg
cacggtttcatccacatgcacgaggacacgccggaattcgtggcacgccacatgatccgc
gaagcgaagtcctacatggattcgctggcgccgccgttcttccgcgcgttggtggattac
gcgcaagacggttcgtattcctggcactgtcccggtcactccggcggcgtggcgttcctg
aagtcgccggtggggcgcatgttccaccagttcttcggcgagaacatgctgcgcgccgac
gtgtgcaacgcggtggacgaactgggacaactgctggaccacaccggcccggtggcagcg
tccgagcgcaatgcggcgcgcattttcaatgcagaccatttgttcttcgttaccaacggc
acttcgacctccaacaagatcgtgtggcactcgatggtggcgccggacgatatcgtggtg
gtggaccgcaactgtcacaagtccatcctgcacgcgatcatgatgaccggtgcggtgccg
gtgttcctgacgccgacgcgcaacaacttcggcatcatcggcccgatcccgaaatcggaa
ttcgagatggcgaacatccagaagaagatcgatgccaacccgttcatcaaggacaagaag
aaaaagccgcgcatcctcaccatcacgcagagcacttacgacggggtgctgtacaacgtt
gaaacgctcaaggagatgctggatggcaggatcgatgcattgcatttcgacgaagcctgg
ctgccgcatgcggcgttccatgacttctacaaagacatgcacgccatcggccgcgaccgt
ccgcgcgcgaaagaatccatggtgttttccacgcagtccacgcacaagctgctggcgggc
ctgtctcaggcctcgcagatactggtgcgcgacagcgagtcgcgcaagctggaccgcgac
tgtttcaacgaagcctacctgatgcacacctcgacctcgccgcaatacgccatcattgcc
tcgtgcgacgtggcggcggcgatgatggagccgcccggcggcaccgcgctggtggaagag
tccatcgccgaagcgctcgatttccgccgcgccatgcgcaaggtggacgccgaattcggc
acggactggtggttcaagatgtgggggccggactatctgtcggaagagggcatggccgag
cgcgaggactgggtgttgcgcgccgacgatcgctggcatggcttcggcaagctggccgag
ggtttcaacatgctcgacccgatcaaggccaccgtggtcacaccgggactggatgtcgat
ggcgattttgccgacagcggcatcccggccagcatcgtcaccaagtaccttgccgaacac
ggtgtggtggtggagaagtgcggcctgtattccttcttcatcatgttcaccatcggcatc
accaaggggcgctggaacagcatggtgaccgagctgcagcagttcaaggacgactacgac
aagaaccagccgctgtggcgtgtgctgccggaattcatcgccaagaacccgcgctatgaa
aagatcggactgcgcgacctgtgcgaccagatccacggcatctacaaggccaacgacgtg
gcgcgcctgaccacggaaatgtacctgtccagcatggtgcctgccatgaagccgtccgac
gccttcgccaagatggcgcatggcgagatcgagcgtgtgtccatcgatgacctggaaggt
cgcgtcaccgccgtgttgttgacgccttatccgccgggcatcccgctgctgatcccgggt
gaacgtttcaacaagaccatcgtcgattacctcaagttcgcgcgcgagttcaacaagaaa
ttccccggtttcgagaccgacatccacggtctggtggcggagaagtccaacggcgaacgc
gtgtactacgtggactgcgtgaagtag
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