Sander lucioperca (pikeperch): 116035763
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Entry
116035763 CDS
T07345
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03022
Basal transcription factors
sluc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116035763 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
116035763 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sluc03021
]
116035763 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
sluc03400
]
116035763 (gtf2h4)
Transcription machinery [BR:
sluc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116035763 (gtf2h4)
DNA repair and recombination proteins [BR:
sluc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116035763 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
116035763
NCBI-ProteinID:
XP_031134938
Ensembl:
ENSSLUG00000011425
LinkDB
All DBs
Position
16:7909266..7922700
Genome browser
AA seq
465 aa
AA seq
DB search
MKLRVHLQCKNLHEYLRELSPEILDRLYNHPATCLAVYRDLPSLAKNYVMRMLFLDQPLP
QAALALWVKIDSQKDHDECVSVLTGLRLWHSQQLQGGLQGYILNPVFKDNLRIALLGGGK
AWADEGSSLGPDRHARDIESLDRYAIERWEVILHFMVGSPCAAVSQDLAQLLVQAGLMKS
EAGEAPYITSAGFQFLLLDTASQLWYFTLQYLKTAQSRGMELVEILSFLFQLSFSTLGRD
YSVEGMSESLLTFLQHLREFGLVFQRKRKSRRYYPTRLAITLAAGVTTSSSSSSSSTLAS
PPGTGDTGFIVVETNYRIYAYTDSELQIALVALFSEMLYRFPNVVVAQVTRESVQQAIAN
GITAQQIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELERDRLRFSEGVLYNQFLSQVD
FEVLRDRAQGLGCLVWQDAAHRVMVVSPQGHSEVKRFWKRQKSST
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaagctacgtgtccatctgcagtgtaagaatctgcatgaatacctgcgagagctgagt
cctgagattttggaccgactgtacaaccacccagcaacatgtctggctgtctacagggac
ctcccctctctggccaagaactatgtgatgcgtatgctgttcctggaccaacctctcccg
caggcagcactggcattatgggtgaaaatagacagtcagaaggatcatgacgagtgtgtc
tcggtgttgacaggactccgcctttggcacagtcagcagctgcagggaggtctgcagggc
tacattttaaatccagtgttcaaagacaacctgaggatagctctgctcggcgggggcaaa
gcgtgggcggatgagggcagctctctgggtcccgaccgccacgcgcgggacattgagagc
ctggaccgatacgccatcgagcgctgggaggtcatcctgcatttcatggtgggttctccc
tgtgctgcggtcagtcaggacctggctcagctgctagtccaagcaggcctcatgaaaagt
gaggcaggagaggcaccctacatcacctcggctggtttccagttcctgctgctggacaca
gcctctcagctgtggtacttcaccctgcagtacctcaaaacggctcagtccagagggatg
gaactggtggagatcctgtcattcttattccaactcagcttctccactcttggcagagat
tactcggtggagggcatgagcgagtcattactcaccttcctgcagcacctgcgggagttt
gggctggtgttccagaggaagaggaagtcgcggcggtattacccgaccaggctagccatc
actctggctgcaggagtcactaccagctcgtcctcgtcctcctcctctactctggcctcc
ccccctggtactggagacaccggcttcattgtggtagaaaccaattatcgtatctacgcc
tacacagactcggagcttcagattgctctggtggctctcttcagtgaaatgctctaccgc
ttccccaacgtagtggttgcccaggtaaccagggagtcggtgcagcaggccatcgccaac
ggcatcacagcacagcagattatccacttcctgaggaccagagcccaccctgtcatgctc
aaacagactcccgtgctgcctccgaccatcacagatcagatccgcctgtgggagctagag
agagatcgactgcgtttctcagagggagtgctctacaaccagttcctctcccaggtcgac
ttcgaggtgctgcgagacagagctcagggtctgggctgtctggtgtggcaggacgcggct
cacagggtgatggtggtgtcgccacagggacacagcgaggtcaagaggttctggaaacga
cagaagtccagtacgtaa
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integrated database retrieval system
