Sander lucioperca (pikeperch): 116036847
Help
Entry
116036847 CDS
T07345
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116036847
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116036847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-B_box
zf-RING_2
zf-RING_5
zf-RING_10
zf-RING_6
CALCOCO1
Gp58
DUF445
U-box
Exonuc_VII_L
MRP-S31
GASH
Motif
Other DBs
NCBI-GeneID:
116036847
NCBI-ProteinID:
XP_035848852
LinkDB
All DBs
Position
16:complement(23301706..23304071)
Genome browser
AA seq
553 aa
AA seq
DB search
MAQKGVQLDRETFSCSICLDLLKDPVTINCGHSYCMNCIKGFWDEGDEKEMYSCPQCRQS
FTPRPVLVKSTMLADLVEELKKTGLQAAPADHCYAGAEDVACDVCTGRKLKAIKSCLQCL
ISYCEKHLQPHFESPAFEKHKLVEPSKKLQENVCSRHDEVMKMFCHQQLICYLCSVDEHK
GHDTVSAAAERAERQRELEGSRQTIQQRIQDREKDVKLLQQQAEAIDRSADKAVEDSEKI
FTELIRLLEKRSSDVKQQVRSQQKREVSRVKELQEKLEQEITELKRKDAELKKLSHTEDH
NQFLHNYPSLSPLSQSTSSIHISPLSCFEDVTAAVSEVRDKLQDVLREEWTNVSLTGTEV
DVLLPQPEPKTRAGFLKYSREITLDPNTAYTLLLLSEGNRKATLMRQHQSYSSHPDRFTG
WCQVLSRESLTGRCYWEVERRGGVYVAVAYKNISRAGGWDECLFGRNDKSWALDCDNNNY
TFWYNKVQTRVSGPESSRVGVYLDHSAGILSFYSVSETMTLLHRVQTTFTQPLYAGLMVY
GSYGNSAELCKLK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggaccgggaaaccttctcttgttccatctgtctggat
ctactgaaggatccggtgactattaactgtggacacagctactgcatgaactgtattaaa
ggcttctgggatgaaggggatgagaaggaaatgtacagctgccctcagtgcaggcagagc
ttcacaccgaggcctgtactggtgaaaagcaccatgttagcagatttagtggaggagctg
aaaaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtg
gcctgtgatgtctgcaccgggagaaaactcaaagccatcaagtcctgtctgcaatgtctg
atctcttattgtgagaaacaccttcagcctcattttgaatcccctgctttcgagaaacac
aagctggtggagccgtccaagaagctccaggagaacgtctgctctcgtcatgatgaggta
atgaagatgttctgccatcagcagcttatctgttatctctgctctgtggatgaacataaa
ggccacgacacagtctcagctgcagcagagagagctgagaggcagagagagctcgagggg
agtcgacagaccatccagcagagaatccaggacagagagaaagatgtgaagctgcttcaa
cagcaggcggaggccatcgatcgctctgctgataaagcagtggaggacagcgagaagatc
ttcaccgagctgatccgtctcctggagaaaagaagctctgatgtgaagcagcaggtcaga
tctcagcagaaaagagaagtgagtcgagtcaaagagcttcaggagaagctggagcaggag
atcactgagctgaagaggaaagacgctgagctgaagaagctctcacacacagaggatcac
aaccagtttctacacaactacccctcactgtcaccactcagccaatcaacatccagcatc
catatcagtcctctgagctgctttgaggacgtgacggcggccgtgtcagaagtcagagat
aaactacaggacgtcctgagagaggagtggacaaacgtctcactgacagggactgaagtg
gacgttttactgccacaaccagagcccaagaccagagctggattcttaaaatattcacgt
gaaatcacactggatccaaacacagcatacacactgctgttattatctgaggggaacagg
aaagcaacattaatgagacaacatcagtcttattctagtcacccagacagattcactggc
tggtgtcaggtcctgagtagagagagtctgactggacgttgttactgggaggtggagagg
agaggaggagtttatgtagcagtcgcatacaagaatatcagcagagcaggggggtgggat
gaatgtttatttggacgaaatgataaatcttgggcgttagattgtgacaacaacaattat
acattttggtacaacaaagtccaaactcgtgtctcaggtcctgagtcctccagagtagga
gtgtacctggatcacagtgcaggtattctgtccttctacagcgtctctgaaaccatgact
ctcctccacagagtccagaccacattcactcagcccctctatgctggactaatggtttat
ggttcttatggaaactctgctgagttgtgtaaactgaaatag
DBGET
integrated database retrieval system
