KEGG   Sander lucioperca (pikeperch): 116037025
Entry
116037025         CDS       T07345                                 
Name
(RefSeq) ras-related protein Rab-39B-like
  KO
K07925  Ras-related protein Rab-39B
Organism
sluc  Sander lucioperca (pikeperch)
Pathway
sluc04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:sluc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    116037025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sluc04131]
    116037025
  09183 Protein families: signaling and cellular processes
   04031 GTP-binding proteins [BR:sluc04031]
    116037025
Membrane trafficking [BR:sluc04131]
 Autophagy
  Other autophagy associated proteins
   Rab GTPases
    116037025
GTP-binding proteins [BR:sluc04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab39/42 [OT]
    116037025
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 Gtr1_RagA RsgA_GTPase GTP_EFTU AAA_22 TniB
Other DBs
NCBI-GeneID: 116037025
NCBI-ProteinID: XP_031136634
Ensembl: ENSSLUG00000025071
LinkDB
Position
13:18982660..18993877
AA seq 213 aa
METIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHNWLEEAQSHVQPHNIVFLL
VGHKCDLEAQRQVTQQEAEKMAGVYGMRYVETSARESINVEKAFVDLTRDIFELVRSGDI
KIQDGWEGVKSGFVPNTVHSSEEVTKGSRQCFC
NT seq 642 nt   +upstreamnt  +downstreamnt
atggagacgatatggctttatcagtttcgtctgatcgtcattggagactccacggtcggc
aagtcgtgtctgatccgaaggtttactgagggccgcttcgcccaggtgtcagacccgacg
gtgggggtggacttcttctcccgcctggtggagatcgagccgggcaaaagaatcaaactt
cagatctgggacactgcgggacaggagaggttcaggtccatcaccagagcttactaccgt
aactcagtgggcgggctcttactctttgacatcacaaaccggcgttccttccagaacgtc
cacaactggctggaggaggcccagagccacgtccagccacacaacattgtcttcctgctg
gtcggtcacaagtgtgacctagaggcccaacgccaggtgacccagcaggaggcagagaag
atggcgggggtctatgggatgcgctacgtggagacctcggcacgagaatctatcaacgtt
gagaaggcgtttgtggatctgacaagagacatctttgagctggtacggagcggggacatc
aagatccaggatggctgggagggcgtcaagagtggatttgttcccaacaccgtccactcc
tctgaggaggttaccaagggcagccggcaatgcttctgctga

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