Sander lucioperca (pikeperch): 116037025
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Entry
116037025 CDS
T07345
Name
(RefSeq) ras-related protein Rab-39B-like
KO
K07925
Ras-related protein Rab-39B
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116037025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116037025
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
sluc04031
]
116037025
Membrane trafficking [BR:
sluc04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
116037025
GTP-binding proteins [BR:
sluc04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
116037025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
GTP_EFTU
AAA_22
TniB
Motif
Other DBs
NCBI-GeneID:
116037025
NCBI-ProteinID:
XP_031136634
Ensembl:
ENSSLUG00000025071
LinkDB
All DBs
Position
13:18982660..18993877
Genome browser
AA seq
213 aa
AA seq
DB search
METIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHNWLEEAQSHVQPHNIVFLL
VGHKCDLEAQRQVTQQEAEKMAGVYGMRYVETSARESINVEKAFVDLTRDIFELVRSGDI
KIQDGWEGVKSGFVPNTVHSSEEVTKGSRQCFC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggagacgatatggctttatcagtttcgtctgatcgtcattggagactccacggtcggc
aagtcgtgtctgatccgaaggtttactgagggccgcttcgcccaggtgtcagacccgacg
gtgggggtggacttcttctcccgcctggtggagatcgagccgggcaaaagaatcaaactt
cagatctgggacactgcgggacaggagaggttcaggtccatcaccagagcttactaccgt
aactcagtgggcgggctcttactctttgacatcacaaaccggcgttccttccagaacgtc
cacaactggctggaggaggcccagagccacgtccagccacacaacattgtcttcctgctg
gtcggtcacaagtgtgacctagaggcccaacgccaggtgacccagcaggaggcagagaag
atggcgggggtctatgggatgcgctacgtggagacctcggcacgagaatctatcaacgtt
gagaaggcgtttgtggatctgacaagagacatctttgagctggtacggagcggggacatc
aagatccaggatggctgggagggcgtcaagagtggatttgttcccaacaccgtccactcc
tctgaggaggttaccaagggcagccggcaatgcttctgctga
DBGET
integrated database retrieval system