Sander lucioperca (pikeperch): 116038000
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Entry
116038000 CDS
T07345
Symbol
tnfrsf11a
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A isoform X2
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
116038000 (tnfrsf11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
sluc04050
]
116038000 (tnfrsf11a)
04090 CD molecules [BR:
sluc04090
]
116038000 (tnfrsf11a)
Cytokine receptors [BR:
sluc04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
116038000 (tnfrsf11a)
CD molecules [BR:
sluc04090
]
Proteins
116038000 (tnfrsf11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
116038000
NCBI-ProteinID:
XP_031138042
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All DBs
Position
1:19336589..19350620
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AA seq
667 aa
AA seq
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MRLNFSTSWIVRGWITCALVTFYAQNAVSKSLQCEETHYLKDSRCCNKCEPGFRVFNDCT
DSQKTICVKCSRGEYQPGLTEKRRCLQPKFCDPVKGFMKRPENPVAEEPCRCLAGLQCHP
INCEYCERIPTCSAGYGLEVDPESTNGRQTCVACKKGFFSADNTAEQCKQWTNCKAEGRS
EIQPGSAQADAVCGPLTSGAAPSWVIVSVLSVITVLCLLILLLFCYKDKLKLLSVNLRSC
VQNLKRTRIQQETLAPLYHSGSGGGTGGGPKCSPCETTKLICQAPHSPADELPCIFPTSV
PDVRVSLPFLGEMKEEGGNKGKTVMADQSKGSGEPEEVSEEEEVVSASPLLAGSCVCVIP
VREPLEVGENEDCSQAVSPGTPGTCSCGGLDGERDGYESGKEEKSGSIRADDSGERSEGN
QTKMVLSKSETGVASLVSLSPPLLHTSSVIPPSSPLPELCLPLSQAQVRAEFKPQLSDSS
LVKQEELYRLASTDSTSTENSTISAMTSVSPLMTSSSVGDLYLDKPPEGLSLKQGQGLSW
GDSRGNKLSSGESELECSPESLHSQLAEPTLTSGQVSGNHNTTFISSGQVMNFSGDVIVV
YVSQTSLGSDGAGQDDAFGRPVQEEANETAPFFQSSLRSQRDSICQSTLQDDTLLVQGVM
EERPLGK
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgagattgaacttttctacaagttggatagtccgaggctggataacatgcgccctcgtc
accttttacgcacagaatgctgtctccaaatctctccagtgtgaggaaacacattattta
aaagactccagatgctgcaacaagtgtgaaccaggcttccgtgtgtttaacgactgtact
gattcccagaagactatatgtgttaaatgtagtcgtggagaataccagcctggcttgact
gaaaagaggcgctgtcttcagccaaagttctgtgacccagttaaggggtttatgaagagg
cctgaaaacccagtggcagaggagccgtgtcgctgccttgccggcctccaatgccacccc
atcaactgtgagtactgtgagaggatacccacctgcagtgctggatatggacttgaggtg
gaccccgagtctactaatggaaggcagacatgtgttgcatgtaagaaaggcttcttctct
gctgacaacactgccgaacaatgcaaacaatggactaattgtaaggctgagggcaggagc
gaaatacagccaggcagcgctcaggctgatgcagtgtgtggaccacttacctctggtgca
gcaccctcctgggttatcgtttcagtgctctcagtcatcactgttctgtgtctccttatc
ctgctcctcttctgctacaaggacaaactgaaattactctctgtaaatctgcgatcctgt
gtccagaatctaaagaggactaggatacaacaggagactttggcccctctttaccacagt
ggatcaggaggaggaacaggaggaggccccaaatgttcaccatgtgagacgaccaaactc
atctgccaagcaccccacagccctgctgatgagctcccatgcatcttccccacttctgtt
cccgatgtcagggtctcactgccattcttgggggaaatgaaagaggaaggagggaacaag
gggaagacagtgatggccgatcagagtaaagggtctggagaacctgaggaggtgtcagag
gaagaggaggttgtgagtgcgtctcctcttttggcaggttcctgtgtgtgcgtcattccc
gtccgcgagccattggaagtaggggagaatgaggactgtagccaggctgtcagccccggg
actccaggaacctgctcgtgtggagggctggatggagaaagggatggatatgagagtggg
aaagaggagaaaagtgggagtataagagcagacgatagtggagaaaggagtgagggaaat
caaacaaagatggttttgtccaagagtgagacaggtgttgcatctcttgtctccctttct
cctccactcctccacacctcctctgtaatccctccgtccagtccactccctgaactctgc
ctgccgttgtctcaggctcaggtgagagcagagttcaaacctcagctgtctgacagctca
ctggtaaaacaggaggaattatacagactggcaagcacagactccacctcaacagagaac
agtacaatctctgccatgacctcggtcagccccttgatgacttcctcatctgttggagat
ctctacctggacaagccccctgaaggcttgagcctgaagcaaggccagggactttcctgg
ggggatagcaggggaaacaagctctcctctggggagtcagaactggagtgctcacctgag
agcctccatagtcagctggctgaaccaactcttacctcaggtcaggtgtctgggaaccac
aacaccacctttatctccagcggtcaggtgatgaactttagcggggatgtcatcgtcgtc
tatgtcagccagacgtctcttggcagtgacggggcggggcaggacgatgcgttcgggaga
cctgtccaggaagaggccaatgagacggctccatttttccaaagcagcctgaggtcacaa
agggactccatttgccaaagcaccttacaagatgatacactgcttgtccagggagtgatg
gaggagcggccgctgggaaagtaa
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