Sander lucioperca (pikeperch): 116040413
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Entry
116040413 CDS
T07345
Symbol
rbfox2
Name
(RefSeq) RNA binding protein fox-1 homolog 2 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sluc03041
]
116040413 (rbfox2)
Spliceosome [BR:
sluc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116040413 (rbfox2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
116040413
NCBI-ProteinID:
XP_031141561
Ensembl:
ENSSLUG00000014730
LinkDB
All DBs
Position
4:44218547..44262930
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AA seq
458 aa
AA seq
DB search
MLMSTDVASIMLPVSRGLMDRDRELDTMAGVHPNAGGAPAVVRGMKRGDPEPDGQTTAAL
VDSTGAECKRPRIDGSGGIGEVGQNNDPLTLGYHGYPSHSQGSQDSAGGQEGLVPPPFSA
FPPPPPPPPQNGLALDYGGSLYAAGAVQGPVEAGGAANSAANVANSLSGQQSDGSSQIDG
QSVVGSGGVGGGGSIGDDSDAKGTPKRLHVSNIPFRFRDPDLRQMFGQYGKILDVEIIFN
ERGSKGFGFVTFETSADAERAREKLHGTLVEGRKIEVNNATARVMTNKKMTTPYSNGEGL
ATLPYAGWKLSPMVGAMYSPELYTVPGFPYPAAAAAAAASTAATFRGAHLRGRARPVYSA
VRAAVPQPAIPTYPGVMAYQDGFYSAADLYGGYAAYRYAQPTAVATPAAAAAAAAAYSDS
YGRVYTADPYHAALAPAAYGVGAMATLYRGGYSRFAPY
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcatccatcatgctgcctgtgtcccggggtctcatggac
cgggatagagagctggacaccatggccggggtgcatcccaacgcgggcggcgctcctgcg
gttgtccggggcatgaaacgcggagacccggagcctgacggacagaccacggctgctctt
gtggactcgaccggggcggagtgcaagcgtccccggatcgacggctcaggggggatcggc
gaggttggtcagaacaacgaccctttgacccttggttaccatggctacccgtctcatagt
cagggctctcaggatagtgctggcggtcaggagggactcgtacctccacctttctccgca
ttccctccacctccaccgccacccccccagaatggcctggcactggattatgggggcagc
ctgtatgcagcgggggccgtccagggccctgtggaagctggtggagcagcgaacagcgct
gccaatgttgccaacagtctcagtggccaacagtcagatggctcctctcagattgacggt
cagtcagttgttggctcaggaggagtaggtggtggagggagcatcggggatgattcagac
gccaaggggacccccaaacgccttcacgtgtccaacatccccttccgcttccgagatccc
gacctacggcagatgtttgggcaatatggcaaaatccttgacgtcgagatcattttcaat
gagaggggatccaagggcttcggttttgtaacatttgagacaagtgcagatgcagagagg
gccagagagaagcttcacggtacgctggtggaaggacgtaaaattgaggtaaataatgcc
acagccagagtgatgacgaacaagaagatgaccaccccttactctaacggagagggcctc
gcaactctaccatacgctggatggaagttgagtcccatggttggagccatgtacagccct
gaactctatacagttccggggtttccatacccagcagcagcagcggcagcagccgcctct
accgctgcaacctttcgaggcgctcatctccggggtcgtgcccggcccgtctacagcgca
gtcagggcagctgtgccacaacctgccatccctacctaccctggtgtgatggcctatcag
gatggcttttacagtgcagctgatctctatggcggctatgcagcgtatcgttacgcccag
ccaactgcggtagcaactccagcagcagcggcggctgcagcagcagcttacagtgacagc
tatggacgagtttacacagcagacccctaccatgctgcgctcgccccagctgcctatggt
gtcggagccatggccacactgtacaggggaggctacagcagatttgccccttactaa
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