Sander lucioperca (pikeperch): 116041788
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Entry
116041788 CDS
T07345
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116041788
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116041788
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
PRY
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_6
Gp58
zf-RING_10
Prok-RING_4
Exonuc_VII_L
WDCP
MRP-S31
Motif
Other DBs
NCBI-GeneID:
116041788
NCBI-ProteinID:
XP_035847722
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Position
14:complement(9223053..9230200)
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AA seq
562 aa
AA seq
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MEQKGVQLDRETFSCSICLDLLKDPVTIPCGHSYCMNCIKSHWDEGDRKYRYSCPQCRKT
FTPRPVLLKNTMLAVLVEELKKTGLQAAPADHCYAGAEDVACDVCTGRKLKAHKSCLICL
VSYCEKHLQPHYDVAQLKKHKLVEPSKKLQENICSRHDEVMKMFCRTDQQLICYLCSVEE
HKGHDTVSAAAERAERQRELEGSRQNIQQRIQDREKDVKLLQQQAEAINRSADKAVEDSK
KIFTELIRLLEKRSSDVKQQVRSQQKREVSRVKELQEKLEQEITELKRKDAELKKLSHTE
DHNQFLHNYPSLSPLSQSTSSIHIRPLSCFEDVTAAVSEVRDKLQDVLREKWTNVSLTGT
EVDVLLPQPKPKTRAGFLKYSREITLDPNTVNTRLLLSEGNRKATLQQQSVVAMLQQYFY
SHPDRFTDWYQVLSRESLTGRCYWEVERRGRGGVSVAVAYKNINRAGGSNECVFGYNDKS
WALDCNNNSYTFWSNNVQTRVSGPESSRVGVYLDHSAGILSFYSVSKTRTLLHRVQTTFT
QPLYAGLMFYYIGDSAELCKLK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaaaggagttcagctggaccgggaaaccttctcttgttccatctgtctggat
ctactgaaggatccggtgactattccctgtggacacagctactgcatgaactgtattaaa
agccactgggatgaaggggatcgtaagtacagatacagctgtcctcagtgcaggaagacg
ttcacaccgaggcctgtcctgctgaaaaacaccatgttagcagttttagtggaggagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtg
gcctgtgatgtctgcaccgggagaaaactcaaagcacacaagtcctgtctgatctgtctt
gtctcttactgtgagaaacaccttcagcctcattacgatgtagctcagttaaagaaacac
aagctggtggagccgtccaagaagctccaggagaacatctgctctcgtcatgatgaggtg
atgaagatgttctgccgtactgatcagcagcttatctgttatctctgctctgtggaggaa
cataaaggccacgacacagtctcagctgcagcagagagagctgagaggcagagagagctc
gaggggagtcgacaaaacatccagcagagaatccaggacagagagaaagatgtgaagctg
cttcaacagcaggcggaggccatcaatcgctctgctgataaagcagtggaggacagcaag
aagatcttcactgagctgatccgtctcctggagaaaagaagctctgatgtgaagcagcag
gtcagatcccagcagaaaagagaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagctgaagaagctctcacacacagag
gatcacaaccagtttctacacaactacccctcactgtcaccactcagccaatctacatcc
agcatccatatccgtcctctgagctgctttgaggacgtgacagcagccgtgtcagaagtc
agagataaactacaggacgttctgagagagaagtggacaaacgtctcactgacagggact
gaagtggacgttttactgccacaaccaaagcccaagaccagagctggattcttaaaatat
tcacgtgaaatcacactggatccaaacacagtaaacacacggctgttattatctgagggg
aacaggaaagcaacattgcaacaacagtctgttgttgcaatgttgcaacaatatttttat
agtcacccagacagattcactgactggtatcaggtcctgagtagagagagtctgactgga
cgttgttactgggaggtggagaggagagggagaggaggagtttctgtagcagtcgcatac
aagaatatcaacagagcaggggggtcgaatgaatgtgtatttggatacaatgacaaatct
tgggcgttagattgtaacaacaacagttatacattttggtccaacaatgtccaaactcgc
gtctcaggtcctgagtcctccagagtaggagtgtacctggatcacagtgcaggtattctg
tccttctacagcgtctctaaaaccaggactctcctccacagagtccagaccacattcact
cagcccctctatgctggactaatgttttattatattggagactctgctgagttgtgcaaa
ctgaaatag
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