Sander lucioperca (pikeperch): 116041794
Help
Entry
116041794 CDS
T07345
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116041794
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116041794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
U-box
zf-RING_6
zf-RING_10
Gp58
RSS_P20
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
116041794
NCBI-ProteinID:
XP_031143711
LinkDB
All DBs
Position
14:complement(10420390..10422334)
Genome browser
AA seq
559 aa
AA seq
DB search
MAQKGVQLDRETFSCSICLDLLKDPVATPCGHSYCMNCIKSFWDEGDEKETHSCPQCRQS
FTPRPVLLKNTMLAVLVEELKKTGLQAAPADHCYAGAEDVACDVCTGRKLKAHKSCLICL
ASFCEKHLQPHYESAPLKKHKLVEPSKKLQENVCSRHDEVMKMFCRTDQQLICYLCSVDE
HKGHDTVSAAAERAERQRELEGSRQNIQQRIQDREKDVKLLQQQAEAINLSADKAVEDSE
KIFTELIRLLEKRSSDVKQQVRSQQKSEVSRVKELQEKLEQEITELKRKDAELKKLSHTE
DHNQFLHNYPSLSPLSQPTFSIHICPLSCFEDVTAAVSEVRDKLQDVLREKWTNVSLTGT
EVDVLLPQSEPKTRAGFLKYSREITLDPNTANTWLLLSEGNRKATFMSQQQSYCSHPDRF
TNKYQVLSRESLTGRCYWEVERRGGGVYVAVTYKNISRAGGSDECRFGRNDKSWALDCNN
NSYTFWSNKVRTPVSGPESSRVGVYLDHSAGILSFYSVSETMTLLHRVQTTFTQPLYAGL
RFHLWFYGSGDSAELCKLK
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggaccgggaaaccttctcttgttccatctgtctggat
ctactgaaggatccggtggctactccctgtggacacagctactgcatgaactgtattaaa
agcttctgggatgaaggggatgagaaggaaacccacagttgtcctcagtgcaggcagagc
ttcacaccgaggcctgtcctgctgaaaaacaccatgttagcagttttagtggaggagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtg
gcctgtgatgtctgcaccgggagaaaactcaaagcacacaagtcctgtctgatctgtctg
gcttctttctgtgagaaacatcttcagcctcattatgaatcagctccattaaagaaacac
aagctggtggagccgtcaaagaagctccaggagaacgtctgctctcgtcatgatgaggtg
atgaagatgttctgtcgtactgatcagcagcttatctgttatctctgctctgtggatgaa
cataaaggccacgacacagtctcagctgcagcagagagagctgagaggcagagagagctc
gaggggagtcgacaaaacatccagcagagaatccaggacagagagaaagatgtgaagctg
cttcaacagcaggcggaggccatcaatctctctgctgataaagcagtggaggacagcgag
aagatcttcactgagctgatccgtctcctggagaaaagaagctctgatgtgaagcagcag
gtcagatctcagcagaaaagtgaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagctgaagaagctctcacacacagag
gatcacaaccagtttctacacaactacccctcactgtcaccactcagccaacctacattc
agcatccatatctgtcctctgagctgctttgaggacgtgacagcggccgtgtcagaagtc
agagataaactacaggacgttctgagagagaagtggacaaacgtctcactgacagggact
gaagtggacgttttactgccacaatcagagcccaagaccagagctggatttttaaaatat
tcacgtgaaatcacactggatccaaacacagcaaacacatggctgttattatctgagggg
aacaggaaagcaacattcatgagtcaacaacagtcttattgtagtcacccagacagattt
actaacaagtatcaggtcctgagtagagagagtctgactggacgttgttactgggaggtg
gagaggagagggggaggagtttatgtagcagtcacatacaagaatatcagcagagcaggg
gggtcggatgaatgtagatttggacgaaatgacaaatcttgggcgttagattgtaacaac
aacagttatacattttggtccaacaaagtccgaactcccgtctcaggtcctgagtcctcc
agagtaggagtgtacctggatcacagtgcaggtattctgtccttctacagcgtctctgaa
accatgactctcctccacagagtccagacaacattcactcagccgctctatgctggacta
aggtttcatctttggttttatggttctggagactctgctgagttgtgtaaactgaaatag
DBGET
integrated database retrieval system
