Sander lucioperca (pikeperch): 116043975
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Entry
116043975 CDS
T07345
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116043975
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116043975
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
Gp58
zf-RING_10
zf-RING_6
OmpH
XhlA
TMEM106_N
Motif
Other DBs
NCBI-GeneID:
116043975
NCBI-ProteinID:
XP_031146892
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Position
9:24498380..24500457
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AA seq
562 aa
AA seq
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MAQKRVKLDWEAFSCSVCLDLLKDPVTTPCGHSYCMDCIKAHWDVEDVKQIHSCPQCRKT
FTPRPVLLKNTMLADLVEEMKKTEELQASPADHCYAGPEDVACDVCTGRKLKALKSCLVC
LVSYCDQHLQPHYNSSAFEKHELVDPSKNLKENICSRHDEVMKIFCRTDQQCICSLCLMD
EHKGHDTVSAAAERTERQKELEGNQQNIQQRIQDREKDVKLLQQEVEAINRSADKAVEDS
AKSFSSLIRFMKSKSTAVKWMVRFQQKTEVSRVKELQEKLEQEITELKRKDAELEKISDT
EDHNQFLHNYSSLSPLSESTDSSSINIRPLRYFKDVTAAVLEVRDKLQDLLRDTWANVSL
TVTKVDVLLSNPNPKPEPKTRADFLTYSHEITLDPNTACRQLLLSEGNRKATCRYEKRPC
SHHPDRFTDVWQVLSKASLTGRCYWEVELRGGRVFVAVAYKDIRRAGSSDECGFGLNDKS
WALRCEKEHYTFLNNNVQTHVPGPVSSRVGVYLDHRAGTLSFYSVTKTMTLLHRVQTTFT
QPLYAGLGLCFDGGTAEFCKLK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaaaagagttaagctggactgggaagccttctcttgttcggtctgtctggat
ctactgaaggatccggtgactactccctgtggacacagctactgcatggactgtattaaa
gctcactgggatgtggaggacgtgaagcaaatccacagttgccctcagtgcagaaagact
ttcacaccgaggcctgtcctactgaaaaacaccatgttagcagatttagtggaggaaatg
aagaagactgaagaactccaagcttctcctgctgatcactgctatgctggacctgaagat
gtggcctgtgatgtctgcactgggagaaaactgaaagccctcaagtcctgtctggtgtgt
ctggtctcttactgtgatcaacaccttcagcctcattataactcctctgcgtttgagaaa
cacgagctggttgacccctccaagaatctcaaggagaacatctgctctcgtcatgatgag
gtaatgaagattttctgccgtactgatcagcagtgtatctgttctctctgcttaatggat
gaacataaaggccacgacacagtctcagctgcagcagaaaggactgagaggcagaaagag
ctcgaggggaatcaacaaaacatccagcagagaatccaggacagagagaaagatgtgaag
ctgcttcaacaggaggtggaggctatcaatcgctctgctgataaagcagtggaggacagt
gcgaagagcttctccagtcttatccgtttcatgaagtccaaaagcacggctgtgaagtgg
atggtccgatttcagcagaaaactgaagtgagtcgagtcaaagagcttcaggagaagctg
gagcaggagatcactgagctgaagaggaaagacgctgagctggagaagatctcagacaca
gaggatcacaaccagtttctacacaactactcctcactgtcaccactcagtgaatctaca
gactcatccagcatcaatatccgtcctctgcgctactttaaggacgtgacagcggctgtc
ttggaagtccgagataaactacaggaccttctgagagacacatgggcaaacgtatcactg
actgtaactaaggtggatgttttactgtcaaatccaaatccaaaaccagaacccaagacc
agagctgactttttaacatattcacatgaaatcacactggatccaaacacagcttgtaga
cagctgttattatctgagggcaacagaaaagcaacatgtaggtatgaaaaacggccttgt
tctcatcacccagacagattcactgatgtttggcaggtattgagtaaagcgagtctgacc
ggacgttgttactgggaggtggagttgagaggggggagagtttttgtagcagtcgcatac
aaggatatcagaagagcagggagctcggatgaatgcggatttggactcaatgacaaatca
tgggcattaaggtgtgaaaaagaacattatacatttttgaacaacaatgtccaaactcat
gtcccaggtcctgtgtcctccagagtaggagtgtacctggatcacagggcaggtactctg
tccttctacagcgtcactaaaaccatgactctcctccacagagtccagaccacgttcact
cagccgctctacgctggacttgggctttgttttgatggaggcactgctgagttctgtaaa
ctcaaatag
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