Sander lucioperca (pikeperch): 116044007
Help
Entry
116044007 CDS
T07345
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116044007
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116044007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
Gp58
zf-RING_10
CALCOCO1
Protocadherin
TMEM106_N
zf-H2C2_2
U-box
Motif
Other DBs
NCBI-GeneID:
116044007
NCBI-ProteinID:
XP_035861391
LinkDB
All DBs
Position
9:25155595..25157809
Genome browser
AA seq
557 aa
AA seq
DB search
MAQRRVKLVRETFSCVICLDLLKDPVTILCGHSYCMDCIQRHWDGEDGKKIYSCPQCRKT
FTPRPVLRKNTMLSDLVEQMMKTGLQAAPADHCYAGPEDVACDVCTGRKLKALKSCLVCL
VSYCDQHLQPHYNSSAFEKHKLVEPSKNLQENICSHHDEVMKIFCRTDQKCICYLCTVDE
HKGHDTVSAAAERTERQKELEGSQQNIQQRIQDREKDVKLLQQEVEAINSYADEAMDDTE
NLFTQLIGLMEQRRSDVKQQVRSQQKTDLSRVKDLQKKLDQEITELKRKDAELKKLSHTE
DHTQFLHNYSSLSPLSETTDSSSINIRPMRYFGYLIAGASEVRDKLQDTVSDLWTNLSTP
GTEVDVVLPNPQSEPKNRAEFLKYSCEITLDPNTANTHMLLSERNRKATLLIEEQSCSSH
PDRFTGCRQVLSKESLTGRCYWEVEWTGRGVQVAVAYNDISRGMSFRECAFGLNDKSWAL
DTYSNSFLHNKVQTLFSGPVSSRVGVYLDHRAGTLSFYSVSETMTLLHRVQTTFTQPLYA
GLLFFFCGATAKFSKLK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagagacgtgttaagctggttcgggaaactttctcttgcgtgatttgtctggat
ctactgaaggatcctgtgactattctctgtggacacagctactgtatggactgtattcaa
cgccactgggatggagaggatgggaagaaaatctacagctgtccccagtgtagaaagact
ttcacaccgaggcctgtactgcggaaaaacaccatgttatcagatttagtggagcaaatg
atgaagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggagaaaactgaaagcactcaagtcctgtctggtgtgtctg
gtctcttactgtgatcaacaccttcagcctcattataactcctctgcgtttgagaaacat
aagctggtggagccctccaagaatctccaggagaacatctgctctcatcatgatgaggtg
atgaagattttctgtcgtactgatcagaagtgtatctgttatctctgcactgtggatgaa
cataaaggccacgacacagtctcagctgcagcagaaaggactgagaggcagaaagagctc
gaggggagtcaacaaaacatccagcagagaatccaggacagagagaaagatgtgaagctg
cttcaacaggaggtggaggctattaatagctatgctgatgaagcaatggatgacacagag
aatttatttactcaactaatcggtctcatggagcaaaggcgctctgatgtgaaacagcag
gtcagatcgcagcagaaaactgatttgagtcgagtcaaagatcttcagaagaagctggat
caagagatcactgagctgaagaggaaagacgctgagctgaagaagctttcacacacagag
gatcacacccagtttctacacaactactcctcactgtcaccactcagtgaaactacagac
tcatccagcatcaatatccgtcctatgcgctactttggttatttgatagcgggcgcgtca
gaagtcagagacaaactacaagacactgtgagcgacctgtggacaaacctctcaacgcct
gggactgaagtggatgttgtactgccaaatccacaatcagagcccaagaacagagctgaa
ttcttaaaatattcatgtgaaatcacactggatccaaacacagcgaacacacatatgttg
ttatctgagaggaacagaaaagctacattactcatagaagaacagtcttgttccagtcac
ccagacagattcactggatgtcgacaagtcctgagtaaagagagtctgactggacgttgt
tactgggaggtggagtggacagggaggggagttcaggtagcagtcgcatacaatgacatc
agcagaggaatgagcttccgtgaatgtgcatttggattgaatgacaaatcctgggcgtta
gacacttattcaaatagtttcttgcacaacaaagtccaaacgctcttctcaggtcctgtg
tcctccagagtaggagtgtacctggatcacagggcaggtactctgtccttctacagcgtc
tctgaaaccatgactctcctccacagagtccagaccacattcactcagccgctctatgct
ggacttttgtttttcttttgtggagccactgccaagttcagtaaactcaaatag
DBGET
integrated database retrieval system
