Sander lucioperca (pikeperch): 116044011
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Entry
116044011 CDS
T07345
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116044011
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116044011
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
U-box
Prok-RING_4
DUF5764
zf-RING_6
DUF995
zf-RING_4
TMEM106_N
Motif
Other DBs
NCBI-GeneID:
116044011
NCBI-ProteinID:
XP_031146927
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Position
9:25142846..25152285
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AA seq
553 aa
AA seq
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MAQRRVKLVRETFSCSFCLDLLKDPVTTPCGHSYCMDCIQRHWDGEDGKQIYSCPQCRKT
FTPRPVLRKNTMLSDLVEQMMKTGLQAAPADHCYAGPEDVACDVCTGRKLKALKSCLVCL
VSYCDQHLQPHYDSSAFEKHKLVEPSKNLQENICSHHDEVMKMFCRTDQQCICYLCSVDE
HKGHDTVSAAAERTERQKELEGSQQNIQQRIQDREKDVKLLQQEVEAINSYADKAVKDSG
NVFYTLTRRLEYRSRALEQHIRFQQKSEVRRAKELKEKLEQEITELKRKDAEMKKLSHTE
NHTQFLHNYSPLSPLSESTDSSSIISRPLRYFEDVITAVAEIKVKLLDVLTDKWANISLT
VPAVDVLLPNPQPKTRAELLKYSRKITLDPNTARPGVMLSEGNRKATLLEEKQTYSSHPD
RFDTMPQVLSKESLTGQCYWEVEYKGGSMCFAVTYKDISRAGRKESVFGWNDKSWALYSY
EGCNYIFFHNNRDTELPGPVSSRVGVYLDHSAGLLSFYRVSDTMTLLHRVQTTFTQPLYA
GVRFYCYGSTVEF
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagagacgtgttaagctggttcgggaaactttctcttgttcgttctgtctggat
ctactaaaggatccggtgactactccgtgtggacacagctactgtatggactgtattcaa
cgccactgggatggagaggatgggaagcagatctacagctgtccccagtgtagaaagact
ttcacaccgaggcctgtcctgcggaaaaacaccatgttatcagatttagtggagcaaatg
atgaagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggagaaaactgaaagccctcaagtcctgtctggtgtgtctg
gtctcttactgtgatcaacaccttcagcctcattatgactcctctgcgtttgagaaacac
aagctggtggagccctccaagaatctccaggagaacatctgctctcatcatgatgaggtg
atgaagatgttctgtcgtactgatcagcagtgtatctgttatctctgctctgtggatgaa
cataaaggccacgacacagtctcagctgcagcagaaaggactgagaggcagaaagagctc
gaggggagtcaacaaaacatccagcagagaatccaggacagagagaaagatgtgaagctg
cttcaacaggaggtggaggctattaatagctatgctgataaagcagtcaaggacagtggg
aacgtcttctacactcttacccgtcgcctggagtacagaagccgtgctctggagcagcat
atcagattccagcagaaaagtgaagtgaggcgagccaaagagcttaaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagatgaagaagctctcacacacagag
aatcacacccagtttctacacaactactccccactgtcaccactcagtgaatctacagac
tcatctagcatcattagccgtcctctgcgctactttgaggatgtgataacggctgtggca
gaaatcaaagttaaactactggacgttcttactgacaaatgggcaaacatctcactgact
gtgcctgcagtggatgttttactgccaaatccacaacccaagaccagagctgaattgtta
aaatattcacggaaaatcacactggatccaaacacagcaagaccaggtgtgatgttatct
gaggggaacagaaaagcaacattattggaagaaaaacaaacatattccagtcatccagac
agatttgatactatgcctcaggtgctgagtaaagagagtctgactggacagtgttactgg
gaggtggagtataaaggggggagcatgtgtttcgcagtcacatacaaggatatcagcaga
gcagggaggaaagaaagtgtctttggatggaatgacaaatcgtgggcgttatattcttac
gaaggttgtaattatatattttttcacaacaatagagatactgagctcccaggtcctgtg
tcctccagagtaggagtgtacctggatcacagtgcaggtcttctgtccttctacagagtc
tctgacaccatgactctcctccacagagtccagaccacattcactcagcctctctacgcc
ggagttcggttttactgttatggaagcactgttgagttctaa
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