Sander lucioperca (pikeperch): 116044838
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Entry
116044838 CDS
T07345
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116044838
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116044838
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-B_box
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
MRP-S31
WDCP
RSS_P20
DivIC
Apolipoprotein
Motif
Other DBs
NCBI-GeneID:
116044838
NCBI-ProteinID:
XP_031148228
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All DBs
Position
9:complement(26592613..26594640)
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AA seq
554 aa
AA seq
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MAQKGVQLDRETFSCSICLDLMKDPVTTFCGHSYCMDCIKSHWDGEDCKKIYSCPECRKT
FTPRPVLLKNTMLADLVEELRKTGFQAAPADHCYAGPEDVACDVCTGRKLKAHKSCLVCL
ASFCEKHLQPHYDAAPLKKHKLVEPSKNLQEKICSRHDEVMKIFCRTDQQCICYLCSVDE
HKGHDTVSAAAERTERQKKLQGSRQNIQQRIQEREKDVKLLKREVEAINRSAHKVGKDSR
KIFTKLICLIEKRRSDVEQQVRSQQDTEMSRVKELQEKLEQEITELKRKDAELEKISYTE
DHNQFLHNYPSLSALSQSTSRIHICPRRYFVDVKAAVSEVRILQEVLREKWAKVPLAVTE
VDVSLPQPEPKTRADFLKYSHEITLDPNTANTRLLLSKGNRKATLMSEDQSYSRHPDRFT
KNLQVLSKESLTGRCYWEVEWRGRGDYVAVAYKNISRKGDLNECGFGQNDKSWALDCDKC
GYTFWYNNLKTPISGPESSRIGVYLDHSAGILSFYSVSETMTLLHRVQTTFTQPLYAGLR
FFSIRDTAELCKLK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaaaaggagttcagctggaccgggaaactttctcttgttccatctgtctggat
ctaatgaaggatccggtgactactttctgtggacacagctactgcatggactgtataaaa
agccactgggatggagaggattgtaaaaaaatctacagctgtcctgagtgcaggaagacg
ttcacaccgaggcctgtcctgctgaaaaacaccatgttagcagatttagtggaggaacta
aggaagactggattccaagctgctcctgctgatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggagaaaactgaaagcacacaagtcctgtctggtgtgtctg
gcttctttctgcgagaaacaccttcagcctcattatgacgcagctccgttaaagaaacac
aagctggtggagccctccaagaatctccaggagaagatctgctctcgtcatgatgaggtg
atgaagatattctgccgtactgatcagcagtgtatctgttatctctgctctgtggatgaa
cacaaaggccacgacacagtctcagctgcagcagaaaggactgagaggcagaaaaagctc
caggggagtcgacaaaacatccagcagagaatccaggagagagagaaagatgtgaagctg
cttaaacgggaagtggaggctatcaatcgctctgctcataaagtagggaaggacagtagg
aagatcttcactaagctgatctgtcttatagagaaaagacgctctgatgtggagcagcag
gtcagatcacagcaggacactgaaatgagtcgagtcaaagagcttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagctggagaagatctcatacacagag
gatcacaaccagtttctacacaactacccctcactgtcagcactcagccaatcaacatcc
agaatacatatctgtcctcggcgctactttgtggacgtgaaagcggccgtgtcagaagtc
agaattttacaggaggttctgagagagaagtgggcaaaagttccactggctgtgactgaa
gtggatgtttcactgccacaaccagagcccaagaccagagctgacttcttaaaatattca
catgaaatcacactggatccaaacacggcaaacactcgtctgttattgtctaaggggaac
agaaaagcaacattaatgagtgaagatcagtcttattctaggcacccagacagattcact
aaaaaccttcaggtcctgagtaaagagagtctgactggacgttgttactgggaggtggag
tggagagggagaggagattatgtagcagtcgcatacaagaatatcagcagaaaaggggat
ttaaatgaatgtggatttggacaaaatgacaaatcttgggcgttagattgtgacaaatgc
ggttatacattttggtacaacaatttgaaaactcccatctcaggtcctgagtcctccaga
ataggagtgtacctggatcacagtgcaggtattctgtccttctacagcgtctctgaaacc
atgactctcctccacagagtccagaccacattcactcagccgctctatgctggacttaga
tttttctctataagagacactgctgagctgtgtaaactgaaatag
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