Sander lucioperca (pikeperch): 116051001
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Entry
116051001 CDS
T07345
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116051001
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116051001
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
Prok-RING_4
zf-RING_5
zf-RING_10
zf-Nse
Gp58
Glycos_transf_1
Motif
Other DBs
NCBI-GeneID:
116051001
NCBI-ProteinID:
XP_031157063
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Position
14:12779026..12780978
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AA seq
557 aa
AA seq
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MAQKGLELDRETFSCSICLDLLKDPVTIPCGHSYCMTCIKSFWDEKETHSCPQCRQRFTP
RPVLLKNTMLAVLVEELKKTGLQAAPADHCYAGAEDVACDFCSGRKLKAHKSCLICLVSY
CEKHLQPHYDVAQLKKHKLVEPSKKLQENVCSRHDEVMKMFCRTDQQLICYLCSLDEHKG
HDTVSAAAESAERQRELEGSRQNIQQRIQDREKDVKLLQQQAEAINLSADKAAEDSEKIF
TELIRLLEKRSSDVEQQVRSRQKSEVSRVKELQEKLEQEITELKRKDAELKKLSHTEAHN
QFLHNYPSLSPLSQPTSSIHICPLSCFEDVTAAVSEVRDKLQDVLREKWTNVSLTGTKVD
VLLPEPEPEPKTRAGFLKYSREITLDPNTAHTQLLLSEGNRKAKFMFKHHSYSNHPDRFT
DFSQVLSRESLTGRCYWEVERSGRGGGGVYVAVTYKNISRAGWSKECVFGRNDKSWALNC
CNNSSTFWCDKVQTPVSGPLSSRVGVYLDHSAGILSFYSVSETMTLLHRVQTTFTQLLYA
GLWIINPEDSAELCKLK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggacttgagctggaccgggaaactttctcttgttccatctgtctggat
ctactgaaggatccggtgactattccctgtggacacagctactgcatgacctgtattaaa
agtttctgggatgagaaggaaacccacagctgtcctcagtgcagacagcgcttcacaccg
aggcctgtcctgctgaaaaacaccatgttagcagttttagtggaggagctgaagaagact
ggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtggcctgtgat
ttctgctctgggagaaaactgaaagcacacaagtcctgtctgatctgtctggtctcttac
tgtgagaaacaccttcagcctcattacgatgtagctcagttaaagaaacacaagctggtg
gagccgtccaagaagctccaggagaacgtctgctctcgtcatgatgaggtgatgaagatg
ttctgccgtactgatcagcagcttatctgttatctctgctctttggatgaacataaaggc
cacgacacagtctcagctgctgcagagagcgccgagaggcagagagagctcgaggggagt
cgacaaaacatccagcagagaatccaggacagagagaaagatgtgaagctgcttcaacag
caggcggaggccatcaatctctctgctgataaagcagcggaggacagcgagaagatcttc
actgagctgatccgtctcctggagaaaagaagctctgatgtggagcagcaggtcagatcc
aggcagaaaagtgaagtgagtcgagtcaaagagcttcaggagaagctggagcaggagatc
actgagctgaagaggaaagacgctgagctgaagaagctctcacacacagaggctcacaac
cagtttctacacaactacccctcactgtcaccactcagccaacctacatccagcatccat
atctgtcctctgagctgctttgaggacgtgacagcggccgtgtcagaagtcagagataaa
ctacaggacgtcctgagagagaagtggacaaacgtctcactgacagggactaaagtggac
gttttgctgccagaaccagaaccagagcccaagaccagagctggattcttaaaatattca
cgtgaaatcacactggatccaaacacagcacacacacagctgttattatctgaggggaac
agaaaagcaaaattcatgtttaaacatcactcttattctaatcacccagacagattcact
gactttagtcaggtcctgagtagagagagtctgactggacgttgttactgggaggtggag
aggagcgggagaggaggaggaggagtctatgtagcagtcacatacaagaatatcagcaga
gcagggtggtcgaaagaatgtgtatttggacgaaatgacaaatcttgggcgttaaattgt
tgcaacaacagttctacattctggtgcgacaaagtccaaacgcccgtctcaggtcctctg
tcctccagagtaggagtgtacctggatcacagtgcaggtattctgtccttctacagcgtc
tctgaaaccatgactctcctccacagagtccagaccacattcactcagctgctctacgct
ggactttggattataaatcctgaagactctgctgagttgtgtaaactgaaatag
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