Sander lucioperca (pikeperch): 116051370
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Entry
116051370 CDS
T07345
Symbol
mars1
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc00450
Selenocompound metabolism
sluc00970
Aminoacyl-tRNA biosynthesis
sluc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
116051370 (mars1)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116051370 (mars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sluc01007
]
116051370 (mars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sluc03016
]
116051370 (mars1)
Enzymes [BR:
sluc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
116051370 (mars1)
Amino acid related enzymes [BR:
sluc01007
]
Aminoacyl-tRNA synthetase
Class I (U)
116051370 (mars1)
Transfer RNA biogenesis [BR:
sluc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
116051370 (mars1)
Prokaryotic type
Other AARSs
116051370 (mars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
Anticodon_3
WHEP-TRS
tRNA-synt_1
GST_C_3
GST_N_2
GST_N_3
GST_C
GST_C_2
GST_N
Motif
Other DBs
NCBI-GeneID:
116051370
NCBI-ProteinID:
XP_031157587
Ensembl:
ENSSLUG00000020616
LinkDB
All DBs
Position
6:complement(8047358..8063925)
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AA seq
925 aa
AA seq
DB search
MKLFVSEGNPHCLKVLAALEVTGVQCDVQYVNHEERVVPFLSRPALPALLLPSGLHLFSS
NAICRYLFEIVGQDSSERCNQWLEWEATDLQPALLQALHMAVLHGKGSEVSKVLQGPLNY
LEQSLSKGNTPYLTGEAVSVADVVLWAALYPVLSDSSLACERTSVKAWFDRGAVLHSCES
AAQKVLQGKGLQGMKSYMQRQPAPQSSQSRDTQPCNSNPAEGVEDERAVSEEEMEAAALT
WSKGLNSCPLAADRQHPILPHEGKRNLLVTSALPYVNNVPHLGNIIGCVLSADVFSRYGR
LRGWNLLFVCGTDEYGTATENKAREEGLTPQQICDKYHAIHSSIYKWFQIDFDFFGRTTT
EKQTEIAQDIFWRIHKHGFLIEDTVEQLRCEKCQRFLADRFVEGICPHCSYPEARGDQCD
KCGRLINAVELREPQCKVCRQTPVVRSSKHLFLDLPKLEPQLEQWLEKSTSTGDWTANAK
QITRSWLRDGLKPRCITRDLRWGTPVPHPDFKEKVFYVWFDAPIGYLSITANYTDKWEKW
WKNPHQVELYNFMAKDNVPFHSVVFPCSLLGAQDNYTLVSHLIATEYLNYEDTKFSKSRG
VGVFGDMAKDTGIPSDVWRFYLLYVRPEGQDSAFSWADMALKNNSELLNNLGNFINRAGM
FVTKFFEGCVPAMELQQEDKKLLALVGWELQQYIQLMDKVKIRDALRHILNISRHGNQYI
QVNEPWKKIKGGDTERQRAGTVTGVSVNIACLLSVMLLPYMPTVSQTIRDQLNAPQSCVN
TMLQGTGTFVCSLSAGHRIGTVSPLFQKLEVDQIEALKKRFGGQQPEDEPPKKKTTAQRA
SSTQPAAVPAAAAEVATSNGVDPEKAKQLTQAVTEQGEKVRALKAQKAEKAVITAEVAKL
LDLKKQLALAEGKSSEPAPQKGKRK
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcttcgtcagtgaaggcaacccgcactgcctgaaggtgttagctgcgttagaa
gtgactggagttcagtgtgacgtccagtatgtcaaccacgaagagagagtggtgcccttc
cttagccgtccagcattgccagccctgctcctgcctagtggactgcaccttttcagctcc
aatgccatctgccgatacctgtttgaaatagttggacaagactccagtgagcgttgcaat
cagtggcttgaatgggaggccacagatcttcagcctgcactgctacaggcccttcacatg
gcagtgctgcatggaaaaggatcagaggtgtccaaggtcctccagggacccctaaactac
ttggagcaaagtttgagcaaggggaacacgccatatttaactggggaagcagtttcagtt
gctgatgttgttttgtgggctgcgctgtaccctgttttatctgactcctcactagcttgc
gaacgcacgtctgtgaaggcttggtttgaccgtggggctgttctgcacagttgcgagtct
gctgctcagaaagtgctgcagggaaaaggcctgcagggcatgaagagctacatgcagaga
cagcctgcccctcagagcagccaaagcagagacacacagccatgcaacagcaaccctgct
gagggtgtggaagatgagcgtgcggtttcagaagaggaaatggaggcagctgctctcacc
tggagtaaaggcttgaactcctgcccactggccgcagacagacagcaccccattctgcca
catgagggcaagcgaaacctccttgtaaccagtgccttgccttatgtcaacaacgtcccc
cacctgggcaacatcattggctgcgtcctcagcgctgatgtcttctccaggtatggccgt
ctgcgaggctggaacttgctgtttgtatgtggtacagatgagtatggcacagctacagag
aacaaggccagagaggagggtctgacaccacagcagatctgcgacaagtaccatgccatt
cattccagcatctacaagtggttccagattgactttgacttttttggcagaaccaccacc
gagaagcagacggagatcgcccaggatattttctggagaatccacaagcacggtttccta
attgaagacacggtggagcaactacgttgtgaaaagtgccagcgcttcctggccgaccgc
ttcgtagaaggcatctgtccccactgcagctacccagaagctcgtggtgaccagtgtgac
aagtgtgggcggctcatcaatgctgtggagctcagggaaccccagtgtaaggtctgcagg
cagactccagtcgtccgctcctccaaacatcttttcttggacctgccaaagctagagcct
cagttggagcagtggctggaaaagtcaaccagcacaggagactggacagcaaatgccaaa
cagatcactcgctcctggctgagagatggactcaaacctcgctgcatcaccagggacctg
cggtggggaacgccagtacctcatcctgactttaaagagaaggtgttctacgtgtggttt
gacgcccccattggttatctgtccattacagccaactacaccgacaaatgggaaaagtgg
tggaagaatcctcatcaggtggagctgtacaacttcatggccaaagacaatgtgcccttc
cacagtgtggtgtttccctgctccctactgggagcacaggacaactacactctggtcagc
caccttattgccactgagtatctgaattacgaggacactaagttttctaagagccgtggt
gtgggtgtgtttggagacatggccaaggacacgggcatcccgtctgatgtgtggcggttc
tacctcctgtatgtgcgtccggagggacaggattcagccttctcctgggctgacatggct
ctgaagaacaactctgagctgctcaacaacttgggcaacttcatcaacagagctggcatg
tttgtcactaagttctttgagggctgtgtgcctgcgatggagctacagcaggaagataag
aagctcctggctctggtgggctgggagctgcagcagtacatccagctcatggacaaagtc
aaaatccgcgacgctctgagacacatcctcaacatctctcgccatggtaaccagtacatc
caggtcaatgaaccctggaagaagatcaagggaggagacacagaaaggcagcgtgcgggc
acagtcaccggagtgtctgtgaatattgcctgcttgctgtcagtgatgctgctgccatac
atgccaacagtcagccaaaccatccgagatcaactcaatgcccctcagtcttgcgtcaat
accatgttgcaaggcactggcacctttgtatgttccctgagtgccggccaccgcatcggc
actgtcagtccgttgttccagaaactggaggtggaccagattgaggctttgaagaagaga
ttcggtggacagcagcccgaagacgaacctcccaaaaaaaagacgacagctcagagagct
agcagcactcagcctgccgctgtgcctgctgccgctgccgaggtggcgacatcgaacgga
gtggacccagaaaaagccaagcagctcacacaggctgtgactgagcagggggaaaaggtg
cgagcactcaaagcccagaaggcggagaaggccgtgatcacagcagaggtggccaaactg
ttggaccttaagaaacagctggctctggctgaggggaagagctctgagccggcacctcag
aagggcaagaggaaatga
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