Sander lucioperca (pikeperch): 116054849
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Entry
116054849 CDS
T07345
Symbol
trim32
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM32
KO
K10607
tripartite motif-containing protein 32 [EC:
2.3.2.27
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116054849 (trim32)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116054849 (trim32)
Enzymes [BR:
sluc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116054849 (trim32)
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116054849 (trim32)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-B_box
zf-RING_4
Baculo_IE-1
zf-RING_11
Prok-RING_4
Sina_RING
Haem_bd
DUF2203
Motif
Other DBs
NCBI-GeneID:
116054849
NCBI-ProteinID:
XP_031162427
Ensembl:
ENSSLUG00000016064
LinkDB
All DBs
Position
14:22867786..22871137
Genome browser
AA seq
685 aa
AA seq
DB search
MEAASSQLDPDLIREVLECPICLETYNQDQMRPKLLQCGHTVCRQCLEKLLANTINGVRC
PFCSKVSRMSSISQLADNLTVLKILDCTTSCSAATAALMCKSCCNRLPRQYCHDCATVLC
ELCKGEGHLHQGHAVQPIRVAAEQRRKELGGKLTSLRDVMGDIQKKKTAIENISKSLRLK
YQAVQQDYTSAELRLQEELSRSRRTFTASMAEVEKLNGQVLEEQTYLLNIAEVKVVSRCD
YLRMLVRQSDIALLKDDGEGNDDEELDLRSSLPIMFQLQEPELVRTEHSKPVEVGQVTTN
TYTVNTEDEERGLEIALEGYVESEAGAIGATGGGRGAPMDHYRDIDMVAAVEDAACGSPG
SFKSKSMDAGGGSPGGAGASAGPAVCQFVKKMGSKGTLPGMFNLPVSICVAQQGEVMVAD
RGNYRIQIFNRKGFQREIRRNASSIDNFVLSFLGADLPNLIPLSIAITPQGLIGVTDNYD
NSVKVYTMDGHCVACHKNQLIKPWGITAMPSGQFVVSDVEGGKLWCIAVDRNLGVVSYNR
LCSAVRPKFVTCDAAGTVYFTQGLALNFEKRHNEPHLEGGFSIGSVDADGQLGKQLSHFF
SETEDFRCITGMCVDVNGDLLVTDSGRKEILQFPKEGGFKILIHEGLTCPVGVATTQKGQ
LLVLDCWDHCVKVYTYIQRRHSSTS
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagcatcttcccagctggacccagatctaataagggaggttcttgaatgccct
atctgcctggagacctacaaccaggatcaaatgagacccaaactcctgcagtgtggtcac
acagtgtgccggcagtgtcttgagaagctattggctaatactataaatggtgtgcgctgc
cccttctgtagcaaggtgtcccgtatgagcagtatctcccaattggccgataatctgact
gtgctcaagatcctagattgtactacatcctgcagtgctgctactgctgccctaatgtgc
aagtcctgctgcaaccgcctaccacgacagtactgccatgattgtgctacagtcctctgt
gagctctgtaaaggggagggccacctgcatcaaggccatgcagtccagccgattagggtg
gctgctgaacagcgtcgtaaagaactaggtggcaagctgacttctctgcgcgatgttatg
ggcgatattcagaagaaaaagacagctattgaaaacatctctaagtccttgagactaaag
taccaggcagtgcagcaggactatacttcagctgagctacgtcttcaagaggaactcagc
aggtctcgaaggacattcacagcctccatggcagaagtggaaaagcttaatgggcaagtc
ctggaggagcagacgtatctcctcaacattgcagaggtaaaagtggtgtcacgctgtgat
tatctgagaatgctggtgaggcagagcgatattgctttgctaaaggatgatggcgaaggt
aatgatgatgaagagctggatttgaggagcagcttgcccatcatgtttcagctgcaagag
ccagagctggtcagaacagagcactctaagcctgtagaagtgggccaagtgaccacaaat
acttatactgtcaatacagaggatgaggagaggggtttggagatagcacttgagggttat
gtagagagtgaagctggggcaataggggctacaggtggtggaaggggggctccaatggat
cattaccgagacattgacatggttgcagctgtagaggatgcggcatgtggttcaccaggc
agctttaagtcaaagtctatggatgcaggtgggggatcacctggaggagctggggcaagt
gcagggccggcagtctgccagtttgtgaagaagatgggctccaagggaacgctacctggc
atgttcaatttaccagtcagcatctgtgtagcacaacaaggtgaggtcatggtggctgac
cgtggcaactaccgcatccagatctttaatcgcaaaggtttccagcgtgaaatccgccgc
aatgccagtagcatcgacaactttgtcctgagcttccttggggctgatctgcctaacctc
atccccttatccattgctatcactcctcaaggcctgattggggtcactgacaactatgat
aactcggttaaagtctacactatggatggacactgtgtggcttgccataagaaccagctg
attaaaccctggggcattactgccatgccatcaggtcagtttgtggtgtcagatgtggaa
ggtggcaagctgtggtgtatcgcagtggaccgcaatctaggtgtggtcagctacaatcga
ttgtgctctgctgtgcggccaaagtttgtgacatgtgatgcggctggaacagtctatttc
acccagggcctagccctgaactttgaaaaacgtcacaatgagccccacctggaaggtggc
ttctctattggctcagtggatgcagacggccagttaggcaagcagctcagccatttcttc
tcagagacggaggacttccgttgtatcactggcatgtgtgtggatgtcaatggggatttg
ctggtaacagacagtggcaggaaagaaatcctccagtttcccaaagagggtggattcaaa
attcttatccatgaagggctgacctgccctgtaggagtggccaccacccagaaaggacaa
ctgcttgtgctggattgttgggaccactgtgtcaaagtctacacatacattcagaggaga
cactcctccacttcatag
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