Sander lucioperca (pikeperch): 116055001
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Entry
116055001 CDS
T07345
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116055001
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116055001
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-B_box
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
U-box
zf-RING_6
zf-RING_10
Gp58
zf-RING_11
zf-C2H2
WDCP
Motif
Other DBs
NCBI-GeneID:
116055001
NCBI-ProteinID:
XP_031162613
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Position
13:24891196..24893123
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AA seq
552 aa
AA seq
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MAQKGVQLDREAFSCSICLDLLKDPVTTPCGHNYCMNCIKSHWDVEDCKYSYSCPQCRKT
FTSRPDLLKNNLLADLVEELKKTGLQAAPADHCYAGAEDVACDVCTGRKLKAHKSCLQCL
ASYCEKHLQLHYESETFKKHKLVEPSKRLQENVCSRHDEVMKIFCRTDQQLICSLCSVDE
HKGHDTVSAAAERAERQRELEGSRQNIQQRIQDREKDVKLLQQQAEAINLSADKAVEDSE
KIFTELIRLLEKRSSDVKQQVRSQQKREVSRVKELQEKLEQEITELKRKDAELKKLSHTE
DHSQFLHNYPSLSPLSQSTSSIHIRPLYYFEDMTAAVSEVRDKLQDVLREKWTKVSLTGT
EVDVLLPPPEPKTRAGFLKYSHEITLDPNTAHTLLLLSEGNRKATVMIQHQSYSSHPDRF
INMWQVLSRESLTGRCYWEVERRGGVDVAVAYKNISRAGGSDECGFGQNDKSWALDCNNS
YIFYYNNVQTPFSGPESSRVGVYLDHSAGILSFYSVSETMTLLHRVQTTFTQPLYAGLRV
YYGSSAELCKLK
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggaccgggaagccttctcttgttccatctgtctggat
ctactgaaggatccggtgactactccctgtggacacaactactgcatgaactgtattaaa
agccactgggatgtagaggattgtaagtacagctacagctgtcctcagtgcaggaagacg
ttcacatcgaggcctgacctgctgaaaaacaacttgttagcagatttagtggaggagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtg
gcctgtgatgtctgcaccgggagaaaactcaaagcacacaagtcctgtctgcaatgtctg
gcttcttactgtgagaaacaccttcagcttcattatgaatcagagacattcaagaaacac
aagctggtggagccgtccaagaggctccaggagaacgtctgctctcgtcatgatgaggtg
atgaagattttctgtcgtactgatcagcagcttatctgttctctctgctctgtggatgaa
cataaaggccacgacacagtctcagctgcagcagagagagctgagaggcagagagagctc
gaggggagtcgacaaaacatccagcagagaatccaggacagagagaaagatgtgaagctg
cttcaacagcaggcggaggccatcaatctctctgctgataaagcagtggaggacagcgag
aagatcttcactgagctgatccgtctcctggagaaaagaagctctgatgtgaagcagcag
gtcagatcccagcagaaaagagaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagctgaagaagctctcacacacagag
gatcacagccagtttctacacaactacccctcactgtcaccactcagccaatctacatcc
agcatccatatccgtcctctgtactactttgaggacatgacagcggccgtgtcagaagtc
agagataaactacaggacgtcctgagagagaagtggacaaaggtctcactgacagggact
gaagtggacgttttactgccaccaccagagcccaagaccagagctggattcttaaaatat
tcacatgaaatcacactggatccaaacacagcacacacactgctgttattatctgagggg
aacaggaaagcaacagtaatgattcaacatcagtcttattctagtcacccagacagattc
attaacatgtggcaggtcctgagtagagagagtctgactggacgttgttactgggaggtg
gagaggagaggaggagttgatgtagcagtcgcatacaagaatatcagcagagcagggggg
tcagatgaatgtggatttggacaaaatgacaaatcttgggcgttagattgtaacaacagt
tatatattttattacaacaatgtccaaactcccttctcaggtcctgagtcctccagagta
ggagtgtacctggatcacagtgcaggtattctgtccttctacagcgtctctgaaaccatg
actctcctccacagagtccagaccacattcactcagcccctctatgctggactaagggtt
tattatggatcctctgctgagttgtgtaaactgaaatag
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